Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1980 |
Symbol | |
ID | 4783767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 2119586 |
End bp | 2120947 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640090550 |
Product | amidase |
Protein accession | YP_001021173 |
Protein GI | 124267169 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.078778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGACG ACCTGCTCTC CCGGCGCGCC CGGGTGCTTG ACGGCACGAG CAGCGCCGGC GCGGAGATCG AGCGCTCACT GCAGCACGCA GCCTCCGCTG CCGTAGCCCC GGCCTTCCTG AAGATCGATG CTGTCGGCGC GCGAGCCGCG GCCCGCGCCG TCGACGCCGC GATCTCCAGC GGCGCCCCGC TGCTGCCGCT CGCCGGTCTG GCCGTCAGCA TCAAGGACCT GTTCGACATC GCCGGTCAGG TCACGACCGC GGGCTCCACG GTACTGACCG ATGCCGAACC GGCTGCGCAG GACGCGCCCG CGGTGTCGCG GCTGCGGGCC GCCGGCGCAG CGCTGATCGG CCGCACCCAC ATGACCGAGT TCGCGTTCTC GGGCGTTGGT CTCAATCCGC ATTACCCCGC GCCGGCCAAC GTGCCAATGG CGACCCTGGA CCGCGACACA CCGCGCATCC CGGGCGGCTC CAGTTCCGGC GCGGCGGTTT CGGTGGCGAG CGGGGCTGCG TGGGCGGCGT TGGGCTCGGA CACCGGCGGT TCGGTGCGAA TCCCCGCCGC ATTGCAGGGT CTGGTCGGCT TCAAGAACAC CGCGTCGCTG ACGCCGACCG AAGGTGCCAT ACCGCTGTCC ACCACGCTCG ACACGGTCTC GGCCCTGACG CGCTCGGTGC GCGACGCCGT ACTGCTGCAC GAGTTGCTGT CAGCCCGCCG CGTTGCGCTG CCTGGCCGGC CGCTGAGGGC CACCCGGCTC GCAGTGCCGA CAACGCTGAT GCTCGACGCG CTGGAGCCTG CCGTGGCCGC GGCCTTCGAA CGCGCCGTGG ACCGGCTGTC GCGCGCCGGC GCGCAGATCG TCACGCTCGA CGTCCCGCCG CTGGCCGACC TGGCGCCGCT GCAGGTCAAC GGTGGTTTCG CGAGCTGCGA AAGCTGGGCC TGGCACCGGC ACCGGCTCGC GACTCACGAA GCCGACTACG ACCGCCGCGT GGTGACGCGC ATCCGCCGCG GCATGGCCAT GAGCGCGGCG GACTACATCG ACCTGCAGAA GGCACGCGCC GCCTGGATCG CTCGCATGCA CGCGGCGCTG CGTGGTTTCG ACGCGGCGCT GTCCCCGACC GTGCCGATCC TCGCGCCACC GATCGCGGCG CTGGAAGCGA GCGACGAGGA ATTCTTCCGC GTCAACTCGC TGCTGCTGCG GAACCCCTCG GTCGTGAACT TGCTCGACGG CTGCGCGATC AGCCTGCCCT GCCAGGCGCC GGGCGACGCG CCAGTCGGCC TGATGCTGTG GTCGCGCGGC CATGCCGACG ACGCCCTGCT CGACATGGCC CTGGCCGTCG AAGCCGCGCT GGCCAATGGA GCATTCTCAT GA
|
Protein sequence | MTDDLLSRRA RVLDGTSSAG AEIERSLQHA ASAAVAPAFL KIDAVGARAA ARAVDAAISS GAPLLPLAGL AVSIKDLFDI AGQVTTAGST VLTDAEPAAQ DAPAVSRLRA AGAALIGRTH MTEFAFSGVG LNPHYPAPAN VPMATLDRDT PRIPGGSSSG AAVSVASGAA WAALGSDTGG SVRIPAALQG LVGFKNTASL TPTEGAIPLS TTLDTVSALT RSVRDAVLLH ELLSARRVAL PGRPLRATRL AVPTTLMLDA LEPAVAAAFE RAVDRLSRAG AQIVTLDVPP LADLAPLQVN GGFASCESWA WHRHRLATHE ADYDRRVVTR IRRGMAMSAA DYIDLQKARA AWIARMHAAL RGFDAALSPT VPILAPPIAA LEASDEEFFR VNSLLLRNPS VVNLLDGCAI SLPCQAPGDA PVGLMLWSRG HADDALLDMA LAVEAALANG AFS
|
| |