| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1880 |
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| Symbol | |
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| ID | 4786760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 2013918 |
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| End bp | 2015396 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640090450 |
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| Product | outer membrane protein |
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| Protein accession | YP_001021073 |
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| Protein GI | 124267069 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0375089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTTT CGCGCGCCCT GACTTTCTCC TTGCTGATCG CCACCTCGAC CGCAGCTCTC
TCCCAGACTG ACGACCCGCT CAAGGCCGCT GCACAGAAAG CCATCCAGAC CAATCCAGAA
GTCACGGCCC GTTTCAACGC CTTTCGCGCC GCCAGCAACG AGGTCGATGT CGCACGCGGC
GCCTACTATC CCCGGGTGGA CCTGAACGCC GACGTCGGTC GCTCGCGCGA CAGCATCGAT
ACGCGGAACC CGAAAGACCA GAGCCTGTCG CGCACCGGCG TCGGAGTCAG CCTGACCCAG
CTGCTGTGGG ACGGCCAGTT GACCCAGTCT GAAGTCAGCC GCTTCGGCCA CGCCCGCAGC
AGCCGCTATT TCGAGTTCAT CGAGGCCACC GAGCAGACTG CCCTGGAAGC CAGCCGTGCC
TACTACGACG TGCTGCGTTT CCGCAGGCTC GTGCTGCTGG CAGAAGACAA CTACGTGCAG
CATAAGGTCT CGCACGACCA GATCCAGAAC CGCTTCAAGG CCGGGGTCGG GCGCGGCGTC
GATGTCGAGC AAGCGGCAGC GCGGCTGGCC CTGGCCGAAA CGAACCTGTC CACCGAGACC
GCCAACCTCC ACGACGTGGT GGCGCGCTAC CAGCGCGTGG TCGGTGAAGC GCCGCCTGCG
CAGCTGACAC TGGGCGCCGG ACTGACCCAG GGCATGCCGG CCAGCGCCAG CGAGGTGCAG
ACACAGGCCA CGCTGCGCAA CGCGGGCATC TCGGCGGCCG TGGAAAACCT GCGGGCCCTG
CGATCGCAAT CCGAGGGGCA GCGCAGCGCC TTCCAGCCGC GCGTCGAGGC ACGCGCCCGC
GGCAGCGAGG GACACAATCT CAATGGCTTG CAGGACCAGC GACGCGAGGC CGCTGCGGAG
GTGGTGCTGA GCTGGAATCT CTTCAATGGC GGCTCCGATC AGGCGCGCGT GCGCCAGTTC
GCCGATCTCG TCACCCAGGC GGCCGACCTG CGCGACCGTA CCTGCCGCGA CGCTCGCCAG
ACCGCCTCGA TCGCGTTCAA CGACACGCTC AAGCTCGTCG AGCAGCTGCG TTATCTCGAG
CGCAACGTCG TTGCGATCGA GCGGGCGCGC GATGCTTACC GCCAGCAGTT CGAGATCGGC
CAGCGCAGCC TGCTCGACCT GCTGAATGCG GAGAACGAGG TCTACACCGC GCGGCGCGCC
TATGCCAACG CGGAGCACGA ACTGCGCATT GCCTACGTGC GCACGCACGC GGCGACCAAC
ACCCTGACCG CCGCGCTCGG CCTGTCGCGG ATCGACACCG GCGCCCTGCC GGACGACAAC
TGGAACGCCG GCGACGATGC CGCGGCACGC TGCCCGATCA CGGCCGCTCC GCTGGCGACC
ACGTCCCGCG AGGAGCTCGA CGCGCGCGCG AAGGCGCTGT CCGAGGCACG CCCCGGCGTC
ACGCCGACCC CGGCCACCAA GGCCCCGGTG GCACGCTGA
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| Protein sequence | MTVSRALTFS LLIATSTAAL SQTDDPLKAA AQKAIQTNPE VTARFNAFRA ASNEVDVARG
AYYPRVDLNA DVGRSRDSID TRNPKDQSLS RTGVGVSLTQ LLWDGQLTQS EVSRFGHARS
SRYFEFIEAT EQTALEASRA YYDVLRFRRL VLLAEDNYVQ HKVSHDQIQN RFKAGVGRGV
DVEQAAARLA LAETNLSTET ANLHDVVARY QRVVGEAPPA QLTLGAGLTQ GMPASASEVQ
TQATLRNAGI SAAVENLRAL RSQSEGQRSA FQPRVEARAR GSEGHNLNGL QDQRREAAAE
VVLSWNLFNG GSDQARVRQF ADLVTQAADL RDRTCRDARQ TASIAFNDTL KLVEQLRYLE
RNVVAIERAR DAYRQQFEIG QRSLLDLLNA ENEVYTARRA YANAEHELRI AYVRTHAATN
TLTAALGLSR IDTGALPDDN WNAGDDAAAR CPITAAPLAT TSREELDARA KALSEARPGV
TPTPATKAPV AR
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