| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1877 |
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| Symbol | |
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| ID | 4786757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 2005834 |
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| End bp | 2010933 |
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| Gene Length | 5100 bp |
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| Protein Length | 1699 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640090447 |
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| Product | hypothetical protein |
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| Protein accession | YP_001021070 |
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| Protein GI | 124267066 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | [TIGR03661] type 1 secretion C-terminal target domain (VC_A0849 subclass) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.070874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCATCG TCGCCACCGT CCAGCTTGGA AAAGTCACCG CCGTCTGGGG CCTTGCCCGG
ATCCGGCTAC CCGATGGCAG CACCCGCCAG ATCCAGGTTG GCGACATCGT GCACAAGGGC
GACCTGATCC TGACGGCGCA GAACAGCATC GTCGAGATCA AGAACGACGG CAGCGAAGCC
ACGTTCGCCG TGGCCGATGG ACAACTCACC GAAACGCCGG CCATTGCCCA GGCCGTTGGG
CCCGAAGACA TCGATCGCGT GATCCAGGCC TTGAACGAAG GCGACCCCGA TGCCGCCACT
GCGGCCGGCG GACCGGCCAG CGGCGGTGAG GCTTCCCCGG CGTTGCGTGT CGGCCGCATC
TCCGAGTCGG TGGGTGGCGA CACGCTTCTG ATCGACACCG CGCGTGCAGG CCGCGAACCC
GCGTCCTTCT TCGACGCCGA GATCCAGGAC GCCGGCCAGC GCGGCGCAGC GGCCCCTGCG
CCCGCCCCGG CGCCCAACCA GAGCCCCGTG CCGGTCATCA CGCCGGCCGG CGGCCTCGAG
GACGCGAGTT CGATCCCGAT CAATCTGTCG GGCACCGATC CGGAGGACGG TACGGCGCCG
ATCGTCACGG TGACCACCCT GCCGCCGGCG TCGCAAGGTC AACTGTTCCT GGCGGACGGG
ACGACGCCTG TCGTGGCGGG TACTCCGCTG ACGGCCGCTC AGGCGGGCTC GCTGGTGTTC
GTGCCGGCTC CGAACTTCAC CGGCACTGCG AATGTCGACT TCACGGTCAC GGATTCCGCC
GGGGCCACGA GTCCCCCGGT CACCGCCAGC ATCGTCGTCG CCCCGGTCAA CGACGCGCCG
GTCGCGATCG GCAGCACCCT CACGGCCGTG GAGGACACGC CCATCTCGCT GAGCATGGGT
GGCATCGACA TCGAAGACGG CACGGCGCCG ATCGTCACGG TCATCCTGTT GCCGACGGCT
TCGCGCGGCA CGCTCTTCCT GGCCGATGGG GTGACACCGG TCGTGGGCGG ACAGCCGCTG
ACCGCAGCCC AGGCTGCGTC GCTGGTGTTC GTGCCCGCGC CCGACTTCAC CGGCACAGTC
AACATCCCGT TCACCGTGAC CGACTCCGAA GGTGCGAGTT CGACCACGGG CGCCGTCCTG
ATCACGGTGA ACCCCGTCAA CGACGCCCCC ATCGGCACGC CAGTGACGGC CACGGGCATT
GAAGACGCCA CGACGATTCC GATCAGCCTG GGCGGCACCG ACGTCGAGGA CGGCATTGCG
CAGACCGTGA CCGTGATCCT GCTGCCTCCG GCCGCGCGCG GAACGCTCTA TCTCGCCGAC
GGCGTCACAC CGGTGGTGGG TGGTGCTCCG CTGACGGCCG AGCAGGCGCA ATCGCTGGTG
TTCGTGCCCG CACCCGACTT CACGGGCACG GTGAACATTC CCTTCACGGT CACCGACTCC
GAGGGTGCCG TGTCGGCCAC CACCACGGCG GCGATCACCG TCACGCCGGT CGCCGATGCC
CCCACGCAGA CGCTGCCCGC CAGCCAATCG CTTCCCGAAG ACACGCTGCA CACCTTCACC
GCGCTCGCCG GCAACGGCAT CACCGTGGCC GACGTCGACA GCGACTTCGT CACCACCACG
CTGACCGTCG GGCACGGCGT CCTTACGGCC GTCGAAGGGA ACGGCGTGGC CATCGCCGGC
AACGGCAGCG GTACTGTCGT GCTGTCCGGC ACGCCCGACC AGATCAACGC TGCGTTGGAG
GGCTTGCGCT ACCAGCCCGA CGTGAACTAC AGCGGATCGG ACGCCTTGAT GGTGAGCACC
ACCGACGGCG AGACCGCACC GGTCGTGGCG AACGTGGCAA TCACCGTGGT GCCGGTGGCC
GATGCGCCGG TGATCAACGT CGGCACGGCC GGCACGGTGC TCTACGACCA GCTGCCCGGC
GCCGTCGAAG GTGCGACCTT CCAGCGCTAC GACAACGTGG CGACGATCGA CCCCGACTCC
GCACGCGATC CCGCGTCGCT GGCCGCGGCG CTGGCTGGCG TGACGCCGAC GGCAACCACG
GTGCAATCCA GCTACGCCGC CCCGACGATC GCCGAGGACC AGGCCTACCG CATGACCGGG
CTGGTGTTCC TGGAGGCCGG CCACACCTAC ACCTTCACCG GCGAGCGCGA CGACACCGCC
CTGATGGTGC TCGGGGGGCA GACCGTGTTC CAGCAGGGCT TCGACAACGC CGGCTTCTAC
CAGGCCGCGC CGTTCGTCGC GAGCGCCTCC GGTTACTACA CGATCGACTT CATCTTCTAC
AACGGCGACG GCCCCGGCAA CGCCGTGCTC ACCGTCAGCA CCGACGGCGC CCCCCCCATC
GCCTTCGACA GCAGCAACTT CACGCTGGTG CCCAGCATCG AAGCGCTCGA TGCGGCGAAC
GCTCCGCACG ACGCGCTGGT CGGCGGCACG GGCGGCGGCT ATTACCCGGT GACGAGCACC
GCTCCGGACA AGGGCACGAT CGGCTTGCCG CCCGTCGGCG TGGCTCTGTC GGACACTGAC
GGCTCGGAAG CGATCTCGGT CGTGACCATC GGGCAGATCC CGGTCGGCGC CACGCTGTCG
GACGGTACGC ACAGCTTCAC GGCCACGGCC GGCAACACCA GCACGGCCGT CACCGACTGG
GCGCTCTTCC AACTGGTGAT CACGCCGCCG CCGCAGTACA GCGGCAGCTT CGACCTGCTC
GTGACCGCCA CCAGCCAGGA GGCCGCCAAC GGCGACGCCG CCTCCAGCAC GGCGACGATC
CCGGTCACGG TGGTCTACAC GAATGAGGCG CCCGTCCAGA CGGTGCCCGG AACGCAGGCC
GTCAACGAGG ACACGCCGCT GGTGTTCTCG GCCGCGAACG GCAATGCCCT GAGCGTTGCC
GACGTCGACA GCCCGTCGCT GACCACGACC GTCAGCGTGA GCAACGGCAT TTTCACGCTG
GGCTCGACGG CCGGCGTCAC GGTGGTCGGC AACGGCAGCA ACCTCGTCAG CCTGATTGGC
TCGGCCGCAG CAATAAATGC CGCGCTGGAA GGCTCGCAGT TCATCGGTCC CGCCGACTTT
AACGGCGCGG CGCAACTGAC CCTGACTACC TCGGACGGCG TGGCCGCCCC GACCGTCGGC
AATGTCGGCA TCTCCATCGT GCCGGTCGCC GACATCGCGA CCGACGTGGC TTCCACTGTC
GAGAATCGAG CGGTAGTGAT CGACGTGAAC GCGAATGACA CGTTCTCGAA CGCCGACCAC
ACCATCACCG CCGTCAACGG CACGCCGATC GCGGCGGGCA CCGCGGTGGC AGTCGCCAAC
GGTAGCGTGC TGCTGCAGGG CGATGGCACG CTGCTCTTCA CGCCGGATCC CGGCTATCAC
ACCTCCACCG GCGTGCCGAC GAGCTTCTCC TACACCGTCA CGTCGGGCGG TCTCACCGAA
ACGGCGGCCG TCGCCGTCGA CGTGCGTCCG GTGAACGATA CGGTCACGCC GACGCTCAAC
GTGACGTCGG TCGGCCGCTG GACTTTCGAC GAAGCCGCGG CGGGCTCGAC CACCGACCGC
TACAACGCGC ACACTGGCGC GCTGACCGAC TCCACGCCGT CGCCGGCGGC CGTGGCTCCG
ACCTGGGTGG CCGGACACGA CGGCGCCTCG GGCAGCGCCC TGCGTTTCGA CGGCGCCGGC
AGCTTCGTCG CGCTGGATGC CCAGACCACG GCGCCGCTGA TGGGCACCGC TTCACTGACC
TTCTGGATCA AGACGACGCA GATCGGCTCC AGCCGCACGA CGGGCTGGAA TTCACCCGCC
GTCATCGCCA GCGAGCAGCA CGGCGGACAG AACGACATCC AGTGGGGCGT TATCAACGAT
GCGGGCCAGA TCGGCTTCGG CATCGGCGAC GTGACCGGCG TCTACAGTAC GACCAGCATC
GACGACAACG CATGGCACCA GGTGGCGATC ACGCGCGACG CGGCGACCAA GCTCGTGCAA
GTCTTCGTCG ACGGCAGGCT GGAAGCCAGC GGCTCACCCA ACGACGCCGC CTTCACGGCC
ACGTTGAACC GGCTGGCGGG CTTCGGTGCC ACGAATGTCT TCGCCAACGA CGCGGCCGGG
ACGAACATGG TCGACAACCA CTTCCTGAGG GCCGATCTCG ACGATGTCCG CATCTACAAC
CACGCGCTCA CGGCCGATCA GGTGGCGGCG ATCCGATCGG TCGAATCGGG CCATCGGGAT
ATCGCCGTGG CCAACGACGG CGATCCGATC AAGCTGAACG TCACCGCAGA CCACTACACC
ACGCTGTCGG TCGCGGGCCT GAACGCGGGC ATGACCCTGA CCGACGGCAC GCCGGGCCAC
GCCGTCACGG CCGCCGGAAC CGACGACACG ATCGACCTGA CCGGCTGGAA CCTGAGCAAC
CTGTCGGTGA CCGGTGCGGG CTCGGCGCTG CTCGAATTCA CGGCGACCAA CACGGTTGCC
GACGAGAGCC GGTCCAGCAC CCAGTACATG AACATCGTGG ACGGTACGTC CCTCCTCGCC
GGCGGGGCCG GCAACGACAC CCTCAACGGC ACCGCGAACG CAGACCTGCT GATCGGCAAC
GGCGGCAACG ACACGCTCAA CGGCGGTGGC GGCAACGATC GGCTGATTGG TGGTGCTGGC
AACGACACCC TGAACGGCGC CGCCGGCCAC GACGTGCTGC AGGGAGGCGC TGGCGACGAC
CTGCTGACGG GCGGCGCCGG TTCTGACACC TTTGCGTGGT CGCTCGCCGA TCGGGGCGCC
AGCGGGGCGC CGGCCCGCGA CACGATTGCC GATTTCAACG TCGCGCCGGT GTCGGCCGGT
GGCGATTCGC TGGACCTGCG GGACCTTCTG GTGGGTGCCA ATCACGTGGG CACTGATCCC
GGCAACCTCG AAAGCTACCT GGACTTCGAC ACCAGTTCCA CGCCGGGCAG CACCATCATC
CACATCAGTT CGTCCGGCGG CTTCGCCAAT GGGGCTTACT CGGCCGGCAG CGAGGATCAG
CGCATCACGC TCGAATCCGT CGACCTGCGC AGCGCGCTGA GCCTGGGTTC AGCGGCCTCC
GACAATCAGA TCATTCAGGA ACTGTTGACG CGCGGCAAGC TGATCGCCGA CGGGCACTGA
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| Protein sequence | MPIVATVQLG KVTAVWGLAR IRLPDGSTRQ IQVGDIVHKG DLILTAQNSI VEIKNDGSEA
TFAVADGQLT ETPAIAQAVG PEDIDRVIQA LNEGDPDAAT AAGGPASGGE ASPALRVGRI
SESVGGDTLL IDTARAGREP ASFFDAEIQD AGQRGAAAPA PAPAPNQSPV PVITPAGGLE
DASSIPINLS GTDPEDGTAP IVTVTTLPPA SQGQLFLADG TTPVVAGTPL TAAQAGSLVF
VPAPNFTGTA NVDFTVTDSA GATSPPVTAS IVVAPVNDAP VAIGSTLTAV EDTPISLSMG
GIDIEDGTAP IVTVILLPTA SRGTLFLADG VTPVVGGQPL TAAQAASLVF VPAPDFTGTV
NIPFTVTDSE GASSTTGAVL ITVNPVNDAP IGTPVTATGI EDATTIPISL GGTDVEDGIA
QTVTVILLPP AARGTLYLAD GVTPVVGGAP LTAEQAQSLV FVPAPDFTGT VNIPFTVTDS
EGAVSATTTA AITVTPVADA PTQTLPASQS LPEDTLHTFT ALAGNGITVA DVDSDFVTTT
LTVGHGVLTA VEGNGVAIAG NGSGTVVLSG TPDQINAALE GLRYQPDVNY SGSDALMVST
TDGETAPVVA NVAITVVPVA DAPVINVGTA GTVLYDQLPG AVEGATFQRY DNVATIDPDS
ARDPASLAAA LAGVTPTATT VQSSYAAPTI AEDQAYRMTG LVFLEAGHTY TFTGERDDTA
LMVLGGQTVF QQGFDNAGFY QAAPFVASAS GYYTIDFIFY NGDGPGNAVL TVSTDGAPPI
AFDSSNFTLV PSIEALDAAN APHDALVGGT GGGYYPVTST APDKGTIGLP PVGVALSDTD
GSEAISVVTI GQIPVGATLS DGTHSFTATA GNTSTAVTDW ALFQLVITPP PQYSGSFDLL
VTATSQEAAN GDAASSTATI PVTVVYTNEA PVQTVPGTQA VNEDTPLVFS AANGNALSVA
DVDSPSLTTT VSVSNGIFTL GSTAGVTVVG NGSNLVSLIG SAAAINAALE GSQFIGPADF
NGAAQLTLTT SDGVAAPTVG NVGISIVPVA DIATDVASTV ENRAVVIDVN ANDTFSNADH
TITAVNGTPI AAGTAVAVAN GSVLLQGDGT LLFTPDPGYH TSTGVPTSFS YTVTSGGLTE
TAAVAVDVRP VNDTVTPTLN VTSVGRWTFD EAAAGSTTDR YNAHTGALTD STPSPAAVAP
TWVAGHDGAS GSALRFDGAG SFVALDAQTT APLMGTASLT FWIKTTQIGS SRTTGWNSPA
VIASEQHGGQ NDIQWGVIND AGQIGFGIGD VTGVYSTTSI DDNAWHQVAI TRDAATKLVQ
VFVDGRLEAS GSPNDAAFTA TLNRLAGFGA TNVFANDAAG TNMVDNHFLR ADLDDVRIYN
HALTADQVAA IRSVESGHRD IAVANDGDPI KLNVTADHYT TLSVAGLNAG MTLTDGTPGH
AVTAAGTDDT IDLTGWNLSN LSVTGAGSAL LEFTATNTVA DESRSSTQYM NIVDGTSLLA
GGAGNDTLNG TANADLLIGN GGNDTLNGGG GNDRLIGGAG NDTLNGAAGH DVLQGGAGDD
LLTGGAGSDT FAWSLADRGA SGAPARDTIA DFNVAPVSAG GDSLDLRDLL VGANHVGTDP
GNLESYLDFD TSSTPGSTII HISSSGGFAN GAYSAGSEDQ RITLESVDLR SALSLGSAAS
DNQIIQELLT RGKLIADGH
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