| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1654 |
|---|
| Symbol | |
|---|
| ID | 4787280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1783963 |
|---|
| End bp | 1784676 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640090223 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001020851 |
|---|
| Protein GI | 124266847 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.142457 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACG CGATGCACAC CCTGCTGACT GCGTCACCGC TGCTCGACCT CCATCACCCA
GAAATTGAGG CACTGGTCGC CCGTCGCGAT TGGCTAACCC TGAGCCCCTA CGACCGCATC
GGCGCCGTCT ACGACTTCGT CCGCAACGAG ATTGCTTTTG GCTACAACGA AGGCGACGAG
CTGCCGGCAT CCCGGGTGCT GGCCGACGGC ATCGGCCAGT GCAACACCAA GAGCACGTTG
CTGATGGCCT TGCTGCGTGC GGTGGGCATC CCCTGCCGCT TCCACGGCTT CACGATCGAC
AAGCCGCTGC AGAAGGGTGC GATCACCGGC CTCGCCTATT GGCTGGCCCC GCAGCGCATC
ATCCACAGCT GGGTCGAGGT CAGCCTGGAA GGCCGGTGGA TCGCGCTGGA AGGCTTCATT
CTCGATGCAC CCTACCTGGC CAGCCTGCAG CGCCGCTTCC CGCAGGCACG GCGCTTCTGC
GGCTACGGCG CCGCCACGCC CGACCTGTCG GCGCCCGGCG TCGATTGGCG CGGCCAGGAC
GCCTACATCC AGAAGGAAGG CATCGCCGAC GACTTCGGCG TCTTCGACAG CCCCGATGCC
TTCTACGCGC GCCACGGCTC CAATCTGTCG GGCGTGAAAC GCTGGCTGTA CGAACGGGTC
ATCCGCCACC GCATGAACCG AAACGTCGCG CGTGTGCGCG CCTCGAAGTG GTGA
|
|---|
| Protein sequence | MSDAMHTLLT ASPLLDLHHP EIEALVARRD WLTLSPYDRI GAVYDFVRNE IAFGYNEGDE
LPASRVLADG IGQCNTKSTL LMALLRAVGI PCRFHGFTID KPLQKGAITG LAYWLAPQRI
IHSWVEVSLE GRWIALEGFI LDAPYLASLQ RRFPQARRFC GYGAATPDLS APGVDWRGQD
AYIQKEGIAD DFGVFDSPDA FYARHGSNLS GVKRWLYERV IRHRMNRNVA RVRASKW
|
|---|
| |