| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1636 |
|---|
| Symbol | |
|---|
| ID | 4787262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1767010 |
|---|
| End bp | 1767492 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640090205 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001020833 |
|---|
| Protein GI | 124266829 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3019] Predicted metal-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.254762 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0395738 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCC GTCACGCACT GGCTTCCTTG CTCAGCGCGG GTGGACTGCT GGCGATCCCT
GGGGTGTTGC AAGCGCAGGG CCAGACGGTG TTCGTCGAGG TCTGGAAGAG CCCAACCTGC
GGATGCTGCA AGGACTGGAT CACCCACCTC GAGGTGAGTG GTTTCCGCGT CAAGGTCAAC
GATGTCGGCA ACACCGCAGC GCGTACTCGG CTGAAAGTTC CCATGAAGCT TGGCTCGTGC
CACACGGCTC TGGTCGGCCG TTATGCCATC GAGGGCCACG TCCCCGCAGT CGACATACGC
CGGCTGCTGA AAGAACGCCC CGACGCGATC GGCCTGGCCG TGCCGGGCAT GCCGGTCGGC
TCACCGGGTA TGGACGGTCC TGCTTTCGAC AACCTGCAGG ACCCCTACGA CGTGCTGCTC
ATCGCCCAAG ATGGCAGTAC CCAGATTTTC AACAGCTACT TCAAGCAAAA GGAACGCTCA
TGA
|
|---|
| Protein sequence | MKRRHALASL LSAGGLLAIP GVLQAQGQTV FVEVWKSPTC GCCKDWITHL EVSGFRVKVN
DVGNTAARTR LKVPMKLGSC HTALVGRYAI EGHVPAVDIR RLLKERPDAI GLAVPGMPVG
SPGMDGPAFD NLQDPYDVLL IAQDGSTQIF NSYFKQKERS
|
|---|
| |