Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1122 |
Symbol | |
ID | 4784604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 1199615 |
End bp | 1200946 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640089685 |
Product | recombination factor protein RarA |
Protein accession | YP_001020318 |
Protein GI | 124266314 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0552039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.120002 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTCGC CCGCTTCCTT GCTTTCCTCG ATCGATGCAG TCGCGTCCGA CGACGCGCCG CTCGCCGAGC GCCTGCGGCC GGCCACGCTC GACGAGGTGA TCGGTCAGCG GCAGCTGCTC GGCGAGGGCA AGCCGTTGCA GGCCGCGTTC GCGTCGGGCC GGCCGCATTC CATGATCCTC TGGGGACCGC CGGGGACCGG CAAGACCACG CTGGCGCGCC TGATGGCGCA TGCCTTCGAC GCCCAGTTCA TCGCCATCTC GGCGGTGCTC GGTGGCGTGA AGGACATCCG CGACGCGGTC GAGCAGGCCC AGGTGGCCCA GGGCATGGGC CGGCGCACCA TCGTCTTCGT CGACGAGGTG CACCGTTTCA ACAAGGCCCA GCAGGACGCC TTCCTGCCGC ACGTCGAGTC GGGCCTGTTC ACCTTCATCG GCGCCACCAC CGAGAACCCA TCGTTCGAGG TCAATTCGGC GCTGCTGTCG CGCGCCACGG TGCATGTGCT GCGTCCGCTC GACGACAGCG AACTGGCCGA ACTGCTGGAG CGCGGCCGGG CGCTGCTGAA TGGATCGCCG CTCAGCGACG CGGCGCGCAC GCGGCTGATC GCCTACGCCG ACGGCGACGC TCGTCGCCTG CTCAACACCT ACGAGAACAT CGCGCGCATG GCCGGTGCCG TGCTCGAGAT CGATGAGGCT TTTCTCGAGC AGGCGCTCGG CGAGCAGCTG CGCCGCTACG ACAAGGGCGG CGACCAGTTC TACGACAGCA TCTCCGCGCT GCACAAGAGC GTGCGCGGTT CCGACCCCGA CGCGTCTCTG TACTGGTTCG TGCGCATGAT CGACGGCGGC GTCGATGCCC GCTACGTCGC GCGCCGCCTG GTGCGCATGG CCAGCGAGGA CGTCGGCCTG GCCGACCCGC GTGCGCTGCG GCTCACCCTC GACGCAGCCG AAACCTATGA ACGCCTCGGT TCTCCCGAAG GCGAGCTGGC GCTAGCCCAG GCCGTGGTCT ACCTGGCCGT GGCGCCCAAG AGCAATGCGG TCTACACCGC CTACAAGGCG GTGCGCGCCT TCGTGAAGAG CGACGGCAGT CGCCCGGTGC CAATGCATCT GCGCAATGCG CCGACCGCAC TGATGAAGCA GCTCGACCAC GGCAAGGGAT ACCGCTACGC GCACGACGAG GAGGGCGGTT TCGCAGCGGG AGAACGCTAC CTGCCCGACG GCGTGGACCA GCAGTTCTAT GTACCGGTGC CGCGCGGGCT GGAGATCAAG ATCGGAGAAA AGCTCTCCCA GCTGCGCGCC CTCAACGTCG CTGCCGACGA AAAAAAGCGC CGGAACTCCT GA
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Protein sequence | MASPASLLSS IDAVASDDAP LAERLRPATL DEVIGQRQLL GEGKPLQAAF ASGRPHSMIL WGPPGTGKTT LARLMAHAFD AQFIAISAVL GGVKDIRDAV EQAQVAQGMG RRTIVFVDEV HRFNKAQQDA FLPHVESGLF TFIGATTENP SFEVNSALLS RATVHVLRPL DDSELAELLE RGRALLNGSP LSDAARTRLI AYADGDARRL LNTYENIARM AGAVLEIDEA FLEQALGEQL RRYDKGGDQF YDSISALHKS VRGSDPDASL YWFVRMIDGG VDARYVARRL VRMASEDVGL ADPRALRLTL DAAETYERLG SPEGELALAQ AVVYLAVAPK SNAVYTAYKA VRAFVKSDGS RPVPMHLRNA PTALMKQLDH GKGYRYAHDE EGGFAAGERY LPDGVDQQFY VPVPRGLEIK IGEKLSQLRA LNVAADEKKR RNS
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