| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2786 |
|---|
| Symbol | |
|---|
| ID | 7271372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2913042 |
|---|
| End bp | 2914238 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643571371 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_002467764 |
|---|
| Protein GI | 219853332 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.879755 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.191146 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTTG ATACCGGCAC CACGGCATGG TTGCTGATCG CGACGGCGCT CGTGATGTTC
ATGACCCCCG GTGTCGGTCT CTTCTATGGC GGAATGGTCA GGCGGAAGAA CTTCATCTCG
ATGATCGCCC TTTCGTTCAT TGCTCTGGCG GTTGTGACCG TCCAGTGGGT ATTCATCGGC
TATTCGCTCG CGTTCGGCCC TGACATTGGC GGAGTGATCG GCGGGCTGCA GTTTATTGGG
CTACACGGGG TCGGCCTCGA CCCCGGTGCC GGCACCTATC CTCCGATCCT CTTTGCGGCC
TTCCAGCTCA CCTTCGCCGC GGTCACGCTG GCTGTGATCA CCTCGGCCTG TGCCGAGCGG
GTGAAGCTCA CTTCGTTCAT CGTACTGGCT CTGCTCTGGA CCACGCTGGT CTATGACCCA
CTGGCCCACT GGGCGTGGGG CGGCGGTTGG GAACAGATGC TCGGTTCGAT CGACTTCGCC
GGCGGCACGG TCGTCGAGAT CAACTCCGGG TTCAGCGCCC TTGCACTGGC GTTCGTCATC
GGGAAACGGG TCGGGTTCGG TGAATACTCG ATGGAACCAC ACAACATCCC GATGGCCCTG
CTCGGAGCTG CGATCCTCTG GTTCGGGTGG TTCGGGTTTA ATGCCGGATC CGCCCTGGCG
GCTGACGGGA TCGCTGCCAA CGCATTCATG GTCACCAACG TTGCAGCTGC TGTCGGGGCG
CTTGCTTGGC TCTTCACCTC CTGGCTCCAT AACCGTCCCT CCTCCCTCGG GATGGTGACC
GGGGCGGTGG CAGGTCTGGT CGCCATCACC CCGGCTGCAG GTTACGTCGA CTCGCTCGCC
GCGGTGGTGA TCGGTGGAGT GGCGGGGGTG CTCTGCTACA AGGCGATGCT CTTCCGGATA
AATATCGGTT ATGATGAGTC CCTGGACGCC TGGGCAGTCC ATGGGGTTGG GGGGCTCTGG
GGAATGTTGG CGACTGGGAT CTTCGCGACG GTCGCAGTGA ATAAGTATTC CGGACTGCTG
GAGGGGAATA TCGATCAGTT CCTTCATAAT GTGCTCGCTG CCGGGGTGGT ATTGGTCTAT
GCCTTTGTGG CCAGTTATCT GATCGGCTGG GTGGTGGACA AAACGATGGG TCTCCGGGTC
TCTGAAGATG AGGAGTATGT CGGCCTCGAC ATATCCCAGC ATGGGGAACG GATCTGA
|
|---|
| Protein sequence | MALDTGTTAW LLIATALVMF MTPGVGLFYG GMVRRKNFIS MIALSFIALA VVTVQWVFIG
YSLAFGPDIG GVIGGLQFIG LHGVGLDPGA GTYPPILFAA FQLTFAAVTL AVITSACAER
VKLTSFIVLA LLWTTLVYDP LAHWAWGGGW EQMLGSIDFA GGTVVEINSG FSALALAFVI
GKRVGFGEYS MEPHNIPMAL LGAAILWFGW FGFNAGSALA ADGIAANAFM VTNVAAAVGA
LAWLFTSWLH NRPSSLGMVT GAVAGLVAIT PAAGYVDSLA AVVIGGVAGV LCYKAMLFRI
NIGYDESLDA WAVHGVGGLW GMLATGIFAT VAVNKYSGLL EGNIDQFLHN VLAAGVVLVY
AFVASYLIGW VVDKTMGLRV SEDEEYVGLD ISQHGERI
|
|---|
| |