| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2750 |
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| Symbol | |
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| ID | 7270858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2877252 |
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| End bp | 2878151 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643571340 |
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| Product | pseudouridylate synthase TruB domain protein |
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| Protein accession | YP_002467735 |
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| Protein GI | 219853303 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00425] rRNA pseudouridine synthase, putative
[TIGR00431] tRNA pseudouridine 55 synthase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG GAACCAAGAA AACTGGGATT GTGATCATCG ACAAGCCACG CGGGCCATCG
AGTCACCAGG TGGCGGCCTG GGTCGGAGAC CTGCTCGGGG TCGATGTCGG CCATGCCGGG
ACGCTGGATC CGATGGTGTC AGGGGTGCTG GTCGTGATGC TCGGCAACGC GGTCAGGCTC
GCCCCGCTCC TCCTCCAACA TGACAAGGAG TACGTCGCCC TGATGCGGCT ACATGGGGAT
GCGGAACCCT CCGATGTGCA GGAGGCAGCC AGGGAATTAA CAGGCAGGGT TTACCAGCGA
CCACCGAGGC GGAGCGCTGT GAAGCGGGCC CTCCGGATCA GGACGATCCA GGACCTAACA
GTCCTCGACC AGCAGGGCCG GTTGGTACTG CTCAGGATCC GGTGCGACGC AGGCACCTAC
ATCCGATCGC TCTGCCATCA CCTCGGCCTC GTCCTCGGTG TGGGCGGGCA TATGCAGGAA
CTCCGAAGGA CCCGATCCGG AACCTTCGAC GAGATGCAGG CCCATACCCT CCACGCTCTC
AAGGACGCGG TTTTCAGGGC TAAAGAAGGG GACTCCTCTG CACTCGACGC GATGATCCTG
CCGGTTGAGG TCGCCATTCC TGAGGTGCAG ACTGTGGTGA TCCGTGACTC CGCAGTCGAT
GCGATCTGCC ATGGAGCCGT CCTCGCCGGC GTTGGCGTCG TCGGTGTGAC GAAATTTAAA
CGTGGGGAGA GGGTGGCTGT ACTGACCGAG AAAAAGGAGT TCGTCTGCCT CGGTCGGGCC
CTCGTCGACG CCACCGCGAT CATCCCCGGC AAACCTGGAC TCGTCGTCGC CCCGGGCACG
GTCTTCATGA CCTCCGGCAC CTACCCCCGG TGCTGGAAGA AGCATCAGAC CTCATGCTGA
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| Protein sequence | MSTGTKKTGI VIIDKPRGPS SHQVAAWVGD LLGVDVGHAG TLDPMVSGVL VVMLGNAVRL
APLLLQHDKE YVALMRLHGD AEPSDVQEAA RELTGRVYQR PPRRSAVKRA LRIRTIQDLT
VLDQQGRLVL LRIRCDAGTY IRSLCHHLGL VLGVGGHMQE LRRTRSGTFD EMQAHTLHAL
KDAVFRAKEG DSSALDAMIL PVEVAIPEVQ TVVIRDSAVD AICHGAVLAG VGVVGVTKFK
RGERVAVLTE KKEFVCLGRA LVDATAIIPG KPGLVVAPGT VFMTSGTYPR CWKKHQTSC
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