| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2744 |
|---|
| Symbol | |
|---|
| ID | 7270852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2872024 |
|---|
| End bp | 2872647 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643571335 |
|---|
| Product | fibrillarin |
|---|
| Protein accession | YP_002467730 |
|---|
| Protein GI | 219853298 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1889] Fibrillarin-like rRNA methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.819778 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTGGA TCGACGGGAC CCTTGTCTCC GAGGGGGAGT CAGGAGTCTA TGGCGAACGG
GTCGTCCAGG GATATCGGGT CTGGGACCCG TACCGCTCCA AGTTCGCGGC CCTGGCCACC
CGATACCGGG AGCGGAATCT GGACCTGACT GGTGATCAAA AGGTGCTGTA CCTCGGGGCG
GCCAATGGGA CCACCGTCTC GCATGTCGCC GACTATGTCG AAGTGGTCTA CGCGGTCGAG
TTCGCCCCGC ACCCGATGCA GGATCTGGTG ATGGTGGCGA GGAGACGGAA GAACGTGATC
CCGATCATGG CCGATGCCGG CCGGCCCGAG CAGTACGCTC CACTCCTCGA GCAGGTGGAC
CTGCTCTATC AGGACGTAGC CCAACCGACG CAGGTCTCGA TCGCCATCGC GAACCTGATC
TTCCTCCGCC CAGGTGGACG GCTGATCCTG ATGCTCAAGA GCAGGTCGGT CGACGTCAGC
AGGGATCCGA AAGAGGTCGC CGCCGAGGCT GCAGCAGCCC TGACCGCTGC CGGCCTTGTC
GTGGAGAGCA TCGACTGGCT GGCCCCGTAC CACCCCGACC ATGCGGCTCT GATCTGCAGA
AAGGGCACTG AAGAGAAGGA TTGA
|
|---|
| Protein sequence | MIWIDGTLVS EGESGVYGER VVQGYRVWDP YRSKFAALAT RYRERNLDLT GDQKVLYLGA
ANGTTVSHVA DYVEVVYAVE FAPHPMQDLV MVARRRKNVI PIMADAGRPE QYAPLLEQVD
LLYQDVAQPT QVSIAIANLI FLRPGGRLIL MLKSRSVDVS RDPKEVAAEA AAALTAAGLV
VESIDWLAPY HPDHAALICR KGTEEKD
|
|---|
| |