Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2687 |
Symbol | |
ID | 7272509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 2817199 |
End bp | 2818848 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643571278 |
Product | type II secretion system protein E |
Protein accession | YP_002467674 |
Protein GI | 219853242 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.719039 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACAGGGT TACGCGATCT GATCAGCGGG TTCAAAAGCG GAGAGGTTAA GGAATCCGGA CCTCAAAAGT CGCAATCATT CTTTTCATCC CTGAAGAGTA AGGTCACTGA TGATAAGAGG ATCGCCGAGT ATGACCCGGC TGTCCATGGA TCTCTGGTGG ATCGGACCCT CCCGAATGAG TATGAACTGA TCGAGAGCTA CTGGGTCGAC GAAGGGTGCT CCCAGGTGAA TATCGTCCAT AACAGAAAGA CCCAGCAGGA TGAATATGTG CTCTATGAAC CCGAACTCTC CCCGTTTGAG TATGAACTGA TCGAGCGGAT CTTTGAGGAT CTCCGTGATG TGCTGATCCT GACTGACGAT GAGATCGGGT TTGACAAGAA CCAGCTCCTC TTTCAGAAGA TGAATGGTCT TCTGGTCGAG TACGGGCTGG TACTCGAACA GTCGACGATG TTCAAACTCC AGTACTTCCT TATTCGGAAC TTCCTTGGCT GGTCCCGTAT CGATGCGGTG ATGAAGGACC CCCATATCGA GGATATATCC TGTGATGGGA CCAATATTCC TCTCTTCCTC TATCACCGGA AATACCGGAA CATCAAGACC AACATCAAGT TCGACGAGGA GTCGCTTATC TCCCTCGCCA TTAAACTGGC TCAGCGTTCA GGAAAGCATA TCTCGATCGG GAGTCCCTTA ATCGATGCGA CGCTTCCGGA TGGGTCACGG TTGCAGCTGG CACTCGGAAA GGAGGTCACC TCCCGGGGGA CATCGTTCAC GATCCGAAAG TTCCGTGAGG AGCCGTTCAC TCCGATTGAA CTGATGGAGT ATCATACTTT CAATGCAGAT GCTCTGGTCT ATTTCTGGCT TGCGATTGAG AACAACAAGA GTCTCCTCTT CATCGGGGGC ACAGCATCAG GGAAGACCAC CTCTTTAAAT GCCGTCTCGC TTTTCATCAC CCCGCTTGCA AAGGTGGTCT CGATCGAGGA TACCCGTGAG ATTACGCTGT ACCATGACAA CTGGATCGCT TCGGTGACCA GGGAGTCGGT GGCTGAGAGT TCATCGACGA TCGATATGTT CGCCCTGCTG AAGTCTGCGA TGCGGCAGCG GCCTGAGTAC ATCATTGTGG GGGAGGTCCG AGGGAACGAG GCCCAGACCC TCTTCCAGGC GATGAACACT GGCCATACCA CCTTCTCGAC GATGCATGCA GGGAGTGTGG ATGCGGCCAT CCACCGTCTT GAGAGCGAAC CGCTGAATGT TCCTCGGAAC ATGGTGCAGG CGCTGAATGT GATCTCGATT CAGGGGCTGA TCTACCAGGG TACAGCCAGG GTGCGCCGGT GTCAGGAGAT CGTCGAGGTG GTCGGGATCG ATCCGTCGAC CGGAAACCTC CGGGTGAACA ATGTCTTCAC CTATGACCCG ATCAGAGATG TGATCGCGTA CACCGGAAGA TCACAGGTCT ATGCCTCGAT CGCCGAGCGG CGGGGATGGT CACGGGACCA GCTCGATGAG GAGATCGCCC TTCGAAAGGA ACTGTTGATG GCGATGCATG ATCAGGATAT CCGGGATTAC CGGTCTGTGT CACGAATCTT CCAGGCCTAT TACATCGATG CACAGCGGGT GATGCGCGTC AAGACTGATC TTCGCAGGAT ACTTGAATGA
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Protein sequence | MTGLRDLISG FKSGEVKESG PQKSQSFFSS LKSKVTDDKR IAEYDPAVHG SLVDRTLPNE YELIESYWVD EGCSQVNIVH NRKTQQDEYV LYEPELSPFE YELIERIFED LRDVLILTDD EIGFDKNQLL FQKMNGLLVE YGLVLEQSTM FKLQYFLIRN FLGWSRIDAV MKDPHIEDIS CDGTNIPLFL YHRKYRNIKT NIKFDEESLI SLAIKLAQRS GKHISIGSPL IDATLPDGSR LQLALGKEVT SRGTSFTIRK FREEPFTPIE LMEYHTFNAD ALVYFWLAIE NNKSLLFIGG TASGKTTSLN AVSLFITPLA KVVSIEDTRE ITLYHDNWIA SVTRESVAES SSTIDMFALL KSAMRQRPEY IIVGEVRGNE AQTLFQAMNT GHTTFSTMHA GSVDAAIHRL ESEPLNVPRN MVQALNVISI QGLIYQGTAR VRRCQEIVEV VGIDPSTGNL RVNNVFTYDP IRDVIAYTGR SQVYASIAER RGWSRDQLDE EIALRKELLM AMHDQDIRDY RSVSRIFQAY YIDAQRVMRV KTDLRRILE
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