Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2671 |
Symbol | |
ID | 7272493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 2799644 |
End bp | 2801389 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643571262 |
Product | Carbohydrate binding family 6 |
Protein accession | YP_002467658 |
Protein GI | 219853226 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.684309 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGAC ACACATTATA TAATATCCTC GTGATCGGGC TGATCCTCGC CGCCGTGGGT GTGGTCTCGG CTGCTGATCC AGTGACTCTG TCTGCAACGA ACGTCTCCGG GGATCAGGTG CAGTCTGCCG ATCCGTTCAT GCACCCATCC CCTGAGGTGT TGAAGCGGTG GATTGATGAA TACAACATGG CCCCGGAGGC ACCACAACCC AGTTTCTTAC GAAGGATGAT GGCATCGTTT CAGACCGAGC AGAACCTGCT CTCTGTGATC TCTTACAATG TCACTGAGCG GAACCAGAAT CCGATCGGGA ACTGCTGGGT ATGGGCCAGC ACTGGGGTGC TGGAAGTTGC TCTCTCCGAG CAACAATCGA TCAAGGACCG GCTCTCGATC CAGTACCTGG ATTCGAACTA TAATGGGGGG TCTGGCCCTA ACTGGGCTGG TGAGGGCGGG ACACTCGGGG ATTTTGTCGG GTTTTATTCG GAGAAGAAGA TTGCGGTTCC CTGGTCCAAC ACCAATGCGA GCTTCCAGGA TGGGACGGCC TACTCTGAGG CCAGAATGAA GGCAGCGGTT GCAGCGGCCG ATATTCAGAC CGTACCGAAC TATCCGATCA CGTCGATCAC TGAGCAGAGG ATTCCAACGG CTGGGGTTGG GGATAGTGCG GCGATCGCGA ATATCAAGGG GACACTCGAT AGCGGTAAAG CACTCTATCT CGGGTTTGTA ATGCCGAACG CCGATGCGGT CGTCAGTTTC AGTAACTTCT GGTATTACCA GGGCGAGGAT GCAGTCTGGA ATCCGTCACC ATTCGCAGGG AAACCGTACG ATCCTTCCCA CGGGGCTAGC CATGCCGTGA CGATCGTCGG CTACAACATG ACCGATCCGA ACAACCGTTA CTGGATCGCG TTGAACAGTA TGGGGGCTGG TGCATCCGGC AACCGGCCTG ACGGGACGTT CCGTATCAAG ATGGACATTG ACTACAACGC CATCTGTCCA TATGTCTTTA CGGTCCCGAT GACCACCTGG GAGACGGAAG GTGTCACGTT TGGAGAGATC CCAACACCGA TCCCAACACT GGCGCCGTAT AACGGCTCGC ACCAGGTCCC AGGGGTGCTC CAGGCCGAGG ACTACGATCT CGGTGGGGAG GGTATAGCTT ATCATGACAC CACCACTGGA AACGCCGGCG GAGCCTACCG GAGCGATGAC GTGGACATAG AGACTGCCGG CGGGATCACC GACATCGGCT GGATCCGGGA CGGCGAGTGG CTCGAGTACA CACTGAATGT TGCCAGTTCC GGTTCATACA CCGCAACGTT CAGGACAGCA ACCTGGAGCA ACGGGAAGGC GATCACCATC CAGGTGGACG GCCAGGAGGT CGGAACCGTG CAGGTCCCCA ACACCGGCGG GTCGGAACAA TATACTAGTG TCTCCACGAC CCTCCCGCTC ACGGCCGGCC TCCGCCACCT GAATCTCTCC TTCGTCGGCG ATGGGCTGAA TCTGGATCAG GTCAGCTTCA CCACCGGCCA GGCGGTTCAG GTAGTTCCAG GGGCGACTGA ACTGCCCCGG GACCTGAACA GCGATGGATT GTACGAGGAT CTGAACGGCG ACGGGTCACT GAACTTCAAT GATGTGGTTC TCTTCTTCAA CCAGATGGAC TGGATCACCG AAAATGAGCC TATCAACACA TTCGACTTCA ATCGGGATGG ACAGATCGAC TTCAATGATA TCGTCCTCCT CTTCAACCAG CTCTGA
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Protein sequence | MQRHTLYNIL VIGLILAAVG VVSAADPVTL SATNVSGDQV QSADPFMHPS PEVLKRWIDE YNMAPEAPQP SFLRRMMASF QTEQNLLSVI SYNVTERNQN PIGNCWVWAS TGVLEVALSE QQSIKDRLSI QYLDSNYNGG SGPNWAGEGG TLGDFVGFYS EKKIAVPWSN TNASFQDGTA YSEARMKAAV AAADIQTVPN YPITSITEQR IPTAGVGDSA AIANIKGTLD SGKALYLGFV MPNADAVVSF SNFWYYQGED AVWNPSPFAG KPYDPSHGAS HAVTIVGYNM TDPNNRYWIA LNSMGAGASG NRPDGTFRIK MDIDYNAICP YVFTVPMTTW ETEGVTFGEI PTPIPTLAPY NGSHQVPGVL QAEDYDLGGE GIAYHDTTTG NAGGAYRSDD VDIETAGGIT DIGWIRDGEW LEYTLNVASS GSYTATFRTA TWSNGKAITI QVDGQEVGTV QVPNTGGSEQ YTSVSTTLPL TAGLRHLNLS FVGDGLNLDQ VSFTTGQAVQ VVPGATELPR DLNSDGLYED LNGDGSLNFN DVVLFFNQMD WITENEPINT FDFNRDGQID FNDIVLLFNQ L
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