| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2462 |
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| Symbol | |
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| ID | 7271631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2598330 |
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| End bp | 2601428 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643571061 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_002467462 |
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| Protein GI | 219853030 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATCAG TTCTCTATGT AGATGATGAG TCCGCACTCC TCGAGATTGG TAAACTGTAC
CTCGAGCGGA CGACCGAATT TTCGGTCACC ACTGCACTTT CTGCTCCGGC CGCCCTCGAT
CTGATGAAAT CCAATGAGAT CCAGGCTGTT GTCTCCGATT ACCAGATGCC GGGAATGGAT
GGCATAGAAC TCTTAAAGAA GATCCGGACG ACGAATAAGA CCATCCCGTT CATCCTCTTC
ACCGGCAGAG GCAGGGAGGA GGTTGCAATC GACGCCTTTG AAAACGGTGC AGACTTTTAT
CTTCAGAAAG GAGGAGCACC CAAACCACAG TTTGCCGAGC TCACGCACAA GATTAAGGCG
GCAGTCGAAC ATCGCCGGGC CGATCAGCAG GTCACCATCG TCAACCGGCT CTATTCGGTG
CTGAGCACGA CAAACAAGGC AATCGTTCAT ATTCATGACA GAACGGAACT GCTGAAGGAG
ATCTGCCGGA TCGTTGTCGA CGATGGCGGT TTTATGATGG CCTGGGCAGG AATCGTCGAT
GATGAAAAAC ACCTCATTGA ACCCATTGCA CAGGCCGGTC ATGTTGAAGG CTATCTGGAT
TCGATCTCGA TATCGACTGA TGACGTGCCC CACGGGCAGG GCCCGACCGG AACTGCATTC
CGGGAAGGAA GATCCAATGT CTGCAATGAT ATCGAAAATA ATTCAGCCAT GGTGGCATGG
CGCAAAGGAG CGCTCGAGCG GGGATATCGT TCCCTTGCCG CCTTCCCCTT CGCACTTGGT
ACGGAAAATG CCGGTGTTCT CACCTTCTTT GCTGCCGAAC CGGGATTTTT TACCGACCGG
ATCATCCGGC TTCTTCATGA ACAGTCCGGG GATATCTCGT TTGCCCTCGC GACGCTTGAT
CATGAAGAGA AACGAAGAAC TGCTGAAGGT GAACTGAGGA GATCTGAACT TCGGTATCGG
CGTCTGTTTC AAACGGCCCA GGATGCGATC CTGATCCTTG ACGGGGACAC CGGGGAGATC
ATCGATGCGA ATAAATTTAT TCTGGATATG CTTGGATACC CACTGGATTA CTTCATCGGG
AAGCATCTCT GGGAACTTGG ATTTATCCAG GATAAATCCC TGGCAAAAAA AGCGTTCACT
GAACTGAAGA CAGAGGGGTA TATCCGATAT GAAGATCTGC CCCTGGAGAC AATTCAGGGC
AGGACGATGA ATGTGGAGTT CATCAGCAAT ATCTACTTTG TTGATGACAA GAGAATTATT
CAGTGCAACA TCCGGGATAT CAGCGAGCGA AAACATGCCG AAGATGACCT GAAGAGATCG
GAACTCAAGT ACCGTCGGCT GTTTCAAACA GCCCAGGATG CGATCCTGAT CCTTAATGGG
GACACCGGGG AGATCATCGA TGCGAACAAA TTCATTCTGG ATATGCTCGG ATACCCGCTG
GATTACTTCC TCGGGAAGCA TCTCTGGGAA CTTGGATTTA TCCAAGATAA ATCCCTGGCA
AAAAAAGCGT TCACTGAACT GAAGACAGAG GGGTATATCC GATATGAAGA TCTGCCCCTG
GAGACAATTC AGGGCAGGAC GATGAATGTG GAGTTCATCA GCAATGTCTA CCTTGTTGAT
GACAGGAGAA TTATCCAGTG CAACATCAGG GACATCAGCG AACGAAAACA TGCCGAAGAG
GCACTCTTGG AGAGCGAAGC GAAGTTCCGG ACGCTCTTTG AAAGTGCAAG CGATGCCATC
TTCATCATGA ACCGTACGGT CTTTCTGGAG TGCAATCACA GCACCGAGGT GATGTATGCC
TGTCCCCGGG ACCAGATCAT CGGACACTCC CCTGTGGAAT TTCTACCTGA ACGACAGCCT
GACGGAAGTC TTTCAGCAGA AAAAGCAAAA GAGAAGATTG ATGCCGCCTT CTCTGGAGAA
CCCCAATTTT TCGAGGGGGT TCTTGCCCGT CATGATCGCA CCCCCTTCGA TGTCGAAATG
ACCCTCAACC GCATTGTGCT CAGAGGAGAT TACTGCCTGC AAGCCATCGT TCGGGACATC
TCCGATCGCA GGCGGGTGGA AGAAGCACTG CACGAACTTG GCGCCTATAA CCGTAGCCTG
ATCGAAGCGA GCATCGATCC TCTCGTAACG ATCAACCGTG ACGGGAAGAT CCAGGATGTG
AATACTGCCA CGGAAGAAGC AACCGGTATG CCAAGGGCTG ACCTGATCGG CACCGATTTT
TCAGATTACT TTACAGAACC AGACCGGGCA GAGGCCGGGT ACAAGATGGT CTTCCGTGAC
GGGACTGTCG TGGATTATGC CCTGGAGATC CGGCACCGGG ATGGTCGGGT GACTCCTGTT
CAGTACAATG CGACGGTGTA CCGCGATGAA TCGGGAAAAA TTGTGGGTGT CTTCGCTGCA
GTCCGTGATA TCACTGAACT GAAGCGGGTG GAGGATGCAT TAAAACTGGC GAACCGGAAA
CTCAACCTCC TTTTCAGTAT CACCCGTCAT GATATCAACA ACCAGCTCAC CGCGCTGCAG
GGATATCTCA ATATAATCGC AGATTCACAG TTGGATCTCG CATTCAGCGA GAATTTTGAG
AAAATATCAA CTGCAACGAA ATGGATCTCC GCCATGATCC AGTTCACCAA AGAATACGAA
GCGATTGGTG TCAATGCCCC GGTCTGGCAG GATATCCGAA TACTTGTGAA TACTGCGGCC
AGGACAGTCC CGTTCGGACA GGTCATGATG AAGAACGATC TCCCTGCTGG TACCGAGATA
TTCGCCGACC TGCTGATAGT CAAGGTCTGT TACAACCTGA TGGATAATGC AGTTCGATAC
GGCGGAACGA TCACGACCAT CCGGTTCTTT GTGCAGGAAT CTGGCGATGA CCTTCTGATC
GTATGTGAGG ACGATGGCGA TGGTGTCCCT GCAGAGCATA AGGAGAAGAT CTTTGAACGT
GGATTTGGGA AGAATACGGG GCTTGGCTTA GCCATCTCTC GGGAGATCCT TGATATTACC
GGTATCGCCA TTCATGAGAT TGGTGAGCCG GGCACGGGGG CACGGTTTGA GATCCTGGTG
CCAAAAGGTA TGTGGCGTAT CACGGGGAAG AACACCTGA
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| Protein sequence | MISVLYVDDE SALLEIGKLY LERTTEFSVT TALSAPAALD LMKSNEIQAV VSDYQMPGMD
GIELLKKIRT TNKTIPFILF TGRGREEVAI DAFENGADFY LQKGGAPKPQ FAELTHKIKA
AVEHRRADQQ VTIVNRLYSV LSTTNKAIVH IHDRTELLKE ICRIVVDDGG FMMAWAGIVD
DEKHLIEPIA QAGHVEGYLD SISISTDDVP HGQGPTGTAF REGRSNVCND IENNSAMVAW
RKGALERGYR SLAAFPFALG TENAGVLTFF AAEPGFFTDR IIRLLHEQSG DISFALATLD
HEEKRRTAEG ELRRSELRYR RLFQTAQDAI LILDGDTGEI IDANKFILDM LGYPLDYFIG
KHLWELGFIQ DKSLAKKAFT ELKTEGYIRY EDLPLETIQG RTMNVEFISN IYFVDDKRII
QCNIRDISER KHAEDDLKRS ELKYRRLFQT AQDAILILNG DTGEIIDANK FILDMLGYPL
DYFLGKHLWE LGFIQDKSLA KKAFTELKTE GYIRYEDLPL ETIQGRTMNV EFISNVYLVD
DRRIIQCNIR DISERKHAEE ALLESEAKFR TLFESASDAI FIMNRTVFLE CNHSTEVMYA
CPRDQIIGHS PVEFLPERQP DGSLSAEKAK EKIDAAFSGE PQFFEGVLAR HDRTPFDVEM
TLNRIVLRGD YCLQAIVRDI SDRRRVEEAL HELGAYNRSL IEASIDPLVT INRDGKIQDV
NTATEEATGM PRADLIGTDF SDYFTEPDRA EAGYKMVFRD GTVVDYALEI RHRDGRVTPV
QYNATVYRDE SGKIVGVFAA VRDITELKRV EDALKLANRK LNLLFSITRH DINNQLTALQ
GYLNIIADSQ LDLAFSENFE KISTATKWIS AMIQFTKEYE AIGVNAPVWQ DIRILVNTAA
RTVPFGQVMM KNDLPAGTEI FADLLIVKVC YNLMDNAVRY GGTITTIRFF VQESGDDLLI
VCEDDGDGVP AEHKEKIFER GFGKNTGLGL AISREILDIT GIAIHEIGEP GTGARFEILV
PKGMWRITGK NT
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