| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2385 |
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| Symbol | |
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| ID | 7272107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2528390 |
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| End bp | 2529211 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643570987 |
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| Product | DNA-directed RNA polymerase subunit D |
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| Protein accession | YP_002467389 |
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| Protein GI | 219852957 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0325899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.710013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCG TATTCAGCAG ACTTGACAAC ACCGTAGCGC GTTATACGCT GACTGGCGTG
AGTCCTTCGT TCATCAATGC CATCCGGAGA GCGATGTGCA GTGAAGTTCC GAAACTTGCG
ATAGAAGATA TTAAAATCTA CGACAATACC AGTGCTCTGT TTGATGAGAT GCTGGCACAC
CGGATCGGGC TCGTCCCGCT GAAGACCAAC TCGGACCTTT ATGTCTCTGC AGATCGGTGT
ACCTGTGAAG GAGCAGGATG CGACCGCTGT TCGACGATGT ATACGTTGAG TGTCGAGGGA
CCGGGGATGG TCTACTCACG GGATCTGATA CCATCAGACC CTGAGGCAGT CCCTGTTGAT
GAGAAGATCC CGATCGTGAA GCTTGAGAAG GGGCAGAAGG TGGTCATTGA GGCACGTGCC
GAGATGAACC TTGGAAAGGT CCATGCCAAG TGGCAGCCCA CAATCAACTG CGGATACAAG
AACTATCCGG TAATCACGGT CGAGACCCAC TGCGATGCAT GTGGTACCTG TGTTGACCAG
TGCCCACGAG ATGTACTGGT TCTGAAGGGC GGTGTGCTCA CCGTCGAAGA GGGAAAGCTC
GAGTCCTGTT CACTCTGCAA ACTCTGTGAA AAGGCATGCC TGAGTACAGG GATCGGAGAT
GAGCCGGGGA TTCGGATCTC CGACGATGCC ACCCGGTTCA TCGGCGTGGT GGAGAGTGAC
GGATCCCTTC CGGTCCGGAC GATTATACGG CAATCGCTGC TGTATCTGAA GAACGAATCA
AACGAGCTGG CTGAAAAATT ACAGGAGATA TCCGAGGGAT AG
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| Protein sequence | MDLVFSRLDN TVARYTLTGV SPSFINAIRR AMCSEVPKLA IEDIKIYDNT SALFDEMLAH
RIGLVPLKTN SDLYVSADRC TCEGAGCDRC STMYTLSVEG PGMVYSRDLI PSDPEAVPVD
EKIPIVKLEK GQKVVIEARA EMNLGKVHAK WQPTINCGYK NYPVITVETH CDACGTCVDQ
CPRDVLVLKG GVLTVEEGKL ESCSLCKLCE KACLSTGIGD EPGIRISDDA TRFIGVVESD
GSLPVRTIIR QSLLYLKNES NELAEKLQEI SEG
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