Gene Mpal_2252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2252 
Symbol 
ID7272549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2400005 
End bp2401093 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content59% 
IMG OID643570864 
Producthypothetical protein 
Protein accessionYP_002467268 
Protein GI219852836 
COG category[L] Replication, recombination and repair 
COG ID[COG3359] Predicted exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.207907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.25741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCA TCCCTATGTC TACCCCGATC GACCAGATCT GCAGCAACCT CGCCGCCAGG 
ATCGACGTTT CCCGTGACTA TACGGTAATC ACACACGACA ACATCTATCG GGCAGGATTC
AGCGATTCAT ACCTCTTTTC ATCCACCTAT CAGCGGGGGC TGTCCATAAA GCAGGAACTG
CTCGAAGCCT ACCTGAATGT TTCGTTCGAT GATGCACTGA ACGGGGAAGT GATCGAAATG
CCGGACGGCC GGAGCTGTTA CCAAGTCACC GATTCTGTTG ACTGCAGGCT GGACCGGCCT
GACCCCGACC TGCTGCGGAC CCTGCTCTGG GAGGATCTGA CGTTGATTCC GGGAATCGGG
GCCAGGACGG CGGCGAGCCT GCAACGACGG GGATATCGAA CGATTAACGA CCTCATCTGG
AATCGGCGGT TCAGGGAGGA AGCGAGCAGG GTGCAGCGAC GGATCGAAAT GACTGACCGA
AACGACCTGC TCGACCTGGT TCTATCGCGC CATTCTCGTT CCCACCGGCT CGCCTTCCTG
GCAGGGTCAC CCCTGCAGAA GAGCGACCTC CTCTTCTTCG ACATCGAGAC GCTTGGGTTC
TTCTCCCGTC CGATCATCCT CTTCGGGCTA GCCAGGCTCA GGGAGAACCA GTTGATCACC
ACCCAGTTCC TGCTGAAGGG GGTCCGGGAC GAGCAGGCGG CCCTGATGGC CACGCTCAAA
CTGTTCTCGC CGGGGACCGT ACTGATCACC TTTAATGGTC GGTCCTTCGA CCTGCCGTAT
CTGCAGGAGC GATGCGCCTA CTACCGGCTG CCGGAGCCGA GGCTGCCTCA GATCGATCTC
CTCCACCACA GCCGATCGCT CTGGAAGAAC CAATTCCAGG ACTGCAAACT CGGTACTTTG
GAGGCAAAAC TCTGCGGGAC GGTCAGAGAG GACGATCTCC CGTCGGCGAT GGTCCCTGAG
TTCTACGCTG CCTATCAGCA GACAGGTAAC CCCGGGCCGC TGGTGCCGAT CGTCGAGCAC
AACCGGCAGG ATCTGGTCAC CACGGCACAC CTCTACGGGC TGATCCAGGA GATCTATCAT
GACCGCTGA
 
Protein sequence
MLIIPMSTPI DQICSNLAAR IDVSRDYTVI THDNIYRAGF SDSYLFSSTY QRGLSIKQEL 
LEAYLNVSFD DALNGEVIEM PDGRSCYQVT DSVDCRLDRP DPDLLRTLLW EDLTLIPGIG
ARTAASLQRR GYRTINDLIW NRRFREEASR VQRRIEMTDR NDLLDLVLSR HSRSHRLAFL
AGSPLQKSDL LFFDIETLGF FSRPIILFGL ARLRENQLIT TQFLLKGVRD EQAALMATLK
LFSPGTVLIT FNGRSFDLPY LQERCAYYRL PEPRLPQIDL LHHSRSLWKN QFQDCKLGTL
EAKLCGTVRE DDLPSAMVPE FYAAYQQTGN PGPLVPIVEH NRQDLVTTAH LYGLIQEIYH
DR