Gene Mpal_2225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2225 
Symbol 
ID7272522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2375861 
End bp2376997 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content55% 
IMG OID643570837 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_002467241 
Protein GI219852809 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0184317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA CATCTATTGG AATTATGATT CTTCTTGGGT CTCTCCTCTT TCTCGGGGTG 
GGGACGACCG CCGTATCTGC GACGGTTCAC ATCCTCCCGC TGGGGGACTC GTTGACAAAA
GGGATGACAG ACACCCCTGA GGATGCGAAC CTCCCATCGT ACCGGTACTG GCTGTATAAT
GACCTGAAGT CAGCCGGGTA TGACTTTGAC TTTGTTGGGA GCTGGACGGA ACCGAACTTT
GCCTTCTCTT TCGACCAGCA CAACGAAGGA CACGGGGGAT ATACCACCGA CGGGATCCTG
AACGGTGCTT CTGATGACCC TGCCCAGGGT AAGCTCTCTC AGTGGCTCAC TGGTTACCAT
GCCGACGTCG TCCTGCTGAT GATCGGGACC AACGATGTCC TCCACCAGGT TCCGACTGAC
ACGTCTGTCA GTAACATCGG TGCGATCATT GACACGGTTC GGGCACGGAA CCCGAATGCA
AAGTTCCTGC TCGCCTCCAT CCCGCCGACC TCAATCTCAA GGGACAACCT GAATGCCCTG
AATGCACGCA TTCCTGCGCT TGCATCCCAG AAGAGCACGG CCCAGTCCCC GGTCTACTTC
GTCGACCAGT ATACAGGCTA CGACGGGGTC AATGACAACG TGGCGTCGAG CGGAGTTCAC
CCAGATAAGA GCGGGGAGAT CAAACTGGCA ACCAACTGGT TTAATGCTCT CAAACAGGTC
CTCGGTGGTT CAGCGGTCAC GACAACGACT ACTGTGCAGA CAACGGTTCC TGTCACGACT
GCCGTGCCGG TCCAGACAGT AGCAATACAG ACTGCTGCAG TTCAGACCGC TGTAACTGTA
CAGCCGACAG CTGTGCAGAC GGTTGCAGCC ACCGCCACGA CCCAGAGTGT CATCGCCTCG
TCCGCGTTTG GATCGAGTTT TGGACTCGGT AAGAACTTTG TCCTCGGTGA CACAAGTTTC
GCTGCCCCGG CCGGTGTGAC TCAGAGTTCA GGGAGCAGTT GGAGCAGCAG CAGTTGGGGT
TCATTCAGTA CAGTATCCAG TGGCTTCACA GGAACTGCCA GTTCAACGAG TTTGACCCCG
CCAAATCAGA TGTTTGTCAG ATGGTATCCA TCCAATTTCC CTGCCGGCAG GGTTTAA
 
Protein sequence
MKRTSIGIMI LLGSLLFLGV GTTAVSATVH ILPLGDSLTK GMTDTPEDAN LPSYRYWLYN 
DLKSAGYDFD FVGSWTEPNF AFSFDQHNEG HGGYTTDGIL NGASDDPAQG KLSQWLTGYH
ADVVLLMIGT NDVLHQVPTD TSVSNIGAII DTVRARNPNA KFLLASIPPT SISRDNLNAL
NARIPALASQ KSTAQSPVYF VDQYTGYDGV NDNVASSGVH PDKSGEIKLA TNWFNALKQV
LGGSAVTTTT TVQTTVPVTT AVPVQTVAIQ TAAVQTAVTV QPTAVQTVAA TATTQSVIAS
SAFGSSFGLG KNFVLGDTSF AAPAGVTQSS GSSWSSSSWG SFSTVSSGFT GTASSTSLTP
PNQMFVRWYP SNFPAGRV