| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2160 |
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| Symbol | |
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| ID | 7270245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2292705 |
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| End bp | 2294519 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643570776 |
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| Product | DNA-directed RNA polymerase subunit B' |
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| Protein accession | YP_002467181 |
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| Protein GI | 219852749 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR03670] DNA-directed RNA polymerase subunit B |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0554265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGT CGAGAGTATT CGTCGACGGC GCGTTGATCG GCCTGGCAGA TGATCCGGAA
GCCCTGATCG CCGATATCAG AAAGATGCGC AGGTCCGGCA CAGTCTCGAC AGAGGTCAAT
GCCAGTTACA AGCAGTATAA TGGCGATGTG ATCATTCACA CCGACCGGGG GCGGGCTCGC
CGGCCTTTGA TCGTGTTACA GAACGGCAAG CCCCTCATCT CCAACGAAGA TCTGGAACGG
CTGAAGAAGA AGGAGATCAC CTTCCAGGAT CTGGTCACCC GTGGCCTGAT CGAGATGATC
GATGCAGAGG AAGAGGAGGA TCTCTATATT GCAATCAACG AGGATCAGGT GACCCCTGAA
CATACCCATC TCGAGGTCGA TCCCTCCCTG ATCCTCGGTA TCGGGGCGGC CCATGTTCCA
TTCCCGGAGC ACAATGCAAG TCCCCGTGTC ACGATGGGTG CAGGGATGGT CAAGCAGGCC
CTTGGGTTCT GCTCGGCCAA TATGAAACTC CGTCCGGACA CCCGTGGCCA CCTGCTTCAC
TATGTCCAGA AGTCCCTGAC CCGCACCCAG ACATCTGAAC TGATCGGTTC AGACGATCGG
CCGGCCGGGC AGAACTTCGT CGTGGCCATC CTCAGTTATG AAGGGTTCAA CATTGAAGAT
GCGCTGATCT TCAACCGTGC CTCGATCGAC CGCGGTCTCG GACGATCTCA CTTCCTCCGG
ACCTACGAGG GCGAGGAGCG GCGGTACCCC GGCGGTCAGG TCGACCGGAT CGAGATCCCC
GACACTGAAG TGACCGGCGC CCATGGGGAA GAATACTACA AGAACCTGGA CGATGACGGT
ATCATCAACC CGGAGACGAC CGTCTCTGAG AAGGATGTGC TGATCGGAAA GACCTCGCCG
CCCCGGTTCC TGGAGGAGCC AAGCAGCGAC CTGATCACCG TCGAGAAACG GCGTGACACA
TCAGTCACGA TGCGATCCAA CGAGCATGGT ATCGTCGATA CTGTAATCAT CACCGAAGGG
GAGAACAGTT CCCGCCTGGT CAAGGTCAGG ACCAGAGATC CCAGGATCCC CGAGATCGGA
GACAAGTTCG CATCCAGGCA CGGGCAGAAG GGAGTCATCG GTCTGATCGC CCCCCAGGAG
GATATGCCCT TCACCGAGAG CGGCATGGTT CCTGATATCG TGATCAACCC GCACGCAATT
CCGAGCCGGA TGACGATCGG ACATATGCTT GAGATGATCG GAGGGAAGGT CGGTTCGCTC
GAAGGACGCC GAATCAACGG AACCGCCTTC AGCGGAGAAC TTGAAGCTGA CCTCCGGTCC
TCACTGAAGA AGTTCGGGTT CTCACCGACA GGCCGTGAGG TCATGTACGA TGGACTCACC
GGCAAGCGGT TCACCGCCGA TATCTATGTT GGTGTGATCT ACTATCAGAA GCTCTACCAC
ATGGTCTCAA GCAAGATGCA CGCACGGTCC CGCGGACCGG TGCAGGTGCT GACCCGGCAG
CCGACAGAAG GTCGTGCCAG GGAAGGAGGT CTCCGGTTTG GTGAGATGGA GCGGGATGTG
ATGATCGGTC ACGGTGCCGC GATGGCACTC AAGGAGCGGT TGCTCGATGA ATCCGACAAG
GTGCAGCAGT ATGTCTGCGC CAAGTGCGGA ATGGTCGCGA TGCTCGACCG AAAACGGAAC
ACCACCCGCT GTCTGGTCTG CGGAAGCGAG ACAGACATCT ACTATGTCGA GATGAGTTAT
GCGTTCAAAC TCCTCCTTGA TGAGATGAAG AGCATGGGGA TCGCCCCGCG CATGATCCTC
GAGGATATGG TATAA
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| Protein sequence | MKKSRVFVDG ALIGLADDPE ALIADIRKMR RSGTVSTEVN ASYKQYNGDV IIHTDRGRAR
RPLIVLQNGK PLISNEDLER LKKKEITFQD LVTRGLIEMI DAEEEEDLYI AINEDQVTPE
HTHLEVDPSL ILGIGAAHVP FPEHNASPRV TMGAGMVKQA LGFCSANMKL RPDTRGHLLH
YVQKSLTRTQ TSELIGSDDR PAGQNFVVAI LSYEGFNIED ALIFNRASID RGLGRSHFLR
TYEGEERRYP GGQVDRIEIP DTEVTGAHGE EYYKNLDDDG IINPETTVSE KDVLIGKTSP
PRFLEEPSSD LITVEKRRDT SVTMRSNEHG IVDTVIITEG ENSSRLVKVR TRDPRIPEIG
DKFASRHGQK GVIGLIAPQE DMPFTESGMV PDIVINPHAI PSRMTIGHML EMIGGKVGSL
EGRRINGTAF SGELEADLRS SLKKFGFSPT GREVMYDGLT GKRFTADIYV GVIYYQKLYH
MVSSKMHARS RGPVQVLTRQ PTEGRAREGG LRFGEMERDV MIGHGAAMAL KERLLDESDK
VQQYVCAKCG MVAMLDRKRN TTRCLVCGSE TDIYYVEMSY AFKLLLDEMK SMGIAPRMIL
EDMV
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