Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2104 |
Symbol | |
ID | 7271582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 2231109 |
End bp | 2234303 |
Gene Length | 3195 bp |
Protein Length | 1064 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643570716 |
Product | MCM family protein |
Protein accession | YP_002467125 |
Protein GI | 219852693 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1241] Predicted ATPase involved in replication control, Cdc46/Mcm family |
TIGRFAM ID | [TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.285341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGAC CCGAGGATGA GTTCGCAGAG ATCAGCGACC GGGTCGCCGA ATGGTCACGA TTCTTAAAGA CCCGGTACAA GAAGGAACTG ACAGAACTCC TTCGTGAGTA CCCGCACAAA CGATCCCTGG TGATCGACTA TCACCAGGTC GAGTCCTTTG GAAAGCCGGG TCTCCGGATG GCCGATGAGA TCCTTGAGAA CCCCGGCAAG GTGATCGAGG ACCTCCGGGA CGCCATCAAG ACCCAGCACG TGGTCAAGAC CAGGAAGAAC GAGCAGATCC CCAGGGAGAT CAACCTCCGG TTCATCAATC TGCCGCAAAA GATCTGCGCC CGGGACATTC GGTCCGAACA GATCAACAAG ATGCTCAGTG TCGAGGGGAT CCTCAGAAAG ACCACCGAGG TGCGTCCCCG GATCGTGGAG GCGATCTTCC GCTGCCCTGC CGGCCATATG ACCAGACGGA TGCAGGAGTA CGGGCGGTTC ATCGAGCCTG AGCAGTGCGG GACCGAGGGG TGCACCTTCC GGAAGCTGCA GCTGATGGCC AAACGCTCCC GGTTCATCGA TGCCCAGAAG GTCAGGATCC AGGAGTCCCC GGAAGGGCTC CGCGGGGGGC AGCAGCCCCA GACTCTCGAC GTCGACGTCA CCGACGACAT CACCGGGACC GTCGCCCCCG GCGACCGGGT GGTGATCAAT GGGATCCTTC GCTCCCAGCA GCGGGTCACC TACGGGACGA AGAGCACCAC CTTCGATATC TATCTGGAGT GCAACTCGAT CGAGGTGGCC GAGAAGGAGT TCGAGGAGGT GAACATCACC GAGAAGGACG AGGAGGAGAT CATCCGCCTC TCCACAGACC CGACCATCTA TCGGAAGATC GTCCACTCGA TCGCCCCGAC GATCTATGGG AATGAGGATG TGAAGGAGGC GATCGCACTG CAGCTCTTCG GCGGGATCAC CAAGGAGATG CCCGATGGGA GCCGGCTGCG TGGAGATATC CATGTGCTCC TGATCGGAGA TCCAGGTATA GCAAAGAGTC AGATCCTCCG GTATGTCGTG AACCTCTCAC CGCGAGGGAT CTACACCAGC GGTCAGTCCT CGACCTCTGC CGGGCTGACG GCCACCGCCG TCAAGGACGA GTTTGGTGAC GGCAGGTGGA CCCTCGAGGC CGGTGCGCTG GTCCTCGCCG ACATGGGGAT CGCCGCCGTC GATGAGATGG ACAAGATGCA GAAGGAGGAC CGGTCGGCCC TGCACGAGGC GATGGAGCAG CAGTGTTATG ATGACCAAAC GGAGATCCTC ACGGAAAAGG GTTGGAAATT TTTCAAAGAT CTGGGGAAGA ATGAACGGGT AGCATCATTA ACCCAGGATG GATTCCTCAC GTACGAAATC CCTTCCCAGC ATGTCATATC AGATTACGAC GGGCAGATGT ATTATATCAA GTCCAGGCAG GTGAACCTCG CGGTAACCCC GAATCATAAC ATGTATGTGA ACCTGAATAA ACGGGCAAAC GATTGGGAAG GATTCAAACT TATCCGGATG GACGAACTGC CGATTAATAA GCGGATGCGG TTTAAAAAGA ACGCAAAATG GCAGGGGGAT ACCGTAGCAA CCCATACAGT TCCCGGGATA ATCAAATTCG GCAATCAGAA CTGTAAGGGA TATGAGACCG AACCGATCAT CGTAAAAATG GATGACTGGC TGGAGTTTCT GGGATATTTC TTATCAGAAG GAAGCGTCCA GAAACACTGG GAAACGGGGG TACCGTACCG GGTTAACATA TCCCAGAAGA TCCCAGAATC CACGGAGATC ATAAGAATAT GTCTCGAAAA ACTGCCGTTT AACTATTCTT ATGATGGGGC AAATTTCTCA ATTAACTCCA AACAGTTAGC CGGGCACCTT GTAGAATTTG GGAAATGCCA CGAAAAATAC GTACCGGCGT ATGCAAAACA GGTACCCCCC GAACAGATCC AGATACTCCT GAATGCGTTA GTATTGGGGG ATGGCTGGAC GAGAAAAACA ACCAGACAGA CGGTATACAT CACCTCTTCA AAAAGACTGG CAGATGATGT AACAGAGTTA CTTCTAAAAA TTGGCTGGTC TGGGAATATC TATTGTCAGC ATCATGCCGG GGATACGATA AAGGATCCAC GAGGTATAGA GACGAGATAC ACCCATGGGA TCTGGGAAGT GTCTTTTATC CGTGACGGAG TGAATGAGCC AAATATCAAT ACCAATGGGG AAAAACACAT CCAGATCAAG CCATATTCAG GAAAAATCTA CTGCGTGGAA GTTCCCGAGC ATCTGCTGTA TGTAAGAAGA GACGGGATTC CAGTTTGGTG CGGAAACACC ATCAGTGTGG CCAAAGCCGG GATCACCGCG ACCTTAAAGA CCCGGTGTGC CCTGCTCGGA GCGGCCAACC CCAAGCTCGG CCGGTTCGAT GAGTATGCCG ATATCGGAGA GCAGATCAAC ATGCCCCCTT CGCTCCTCTC CCGGTTCGAC CTGATCTTCA TCCTGACCGA CAAGCCGGAT CACAAACGGG ACGAGGCGAT CGCCGACTTC ATCATCAGGT CACACGGGGT GGGCGAACTG ATCGCCCAGC ACAGCCGGGA TCCAATCGAG GGCGTGACCG ACGAGTACAT CACCCAGCAA CTCGCCCCGG TCACCCCGGA CATCGACGCC GGCATGCTGC GGAAGTACAT CGCCTATGCA AAGCGGACCT GTTTCCCGAT CCTCAGCACT GAAGCGAAGG AGACCCTGAT CGCCTACTAC ATGAAACTCC GTGACCTGGC CGACTCCAAC AAGCCGGTCC CGGTGACGGC ACGGCAGCTC GAGGCACTGG TCAGGCTGGC CGAGGCCAGC GCACGGGTCA GGCTGAGCAA GTCTATCGAG AACTCAGATG CCGAACGGGT CGTGAAGATC GTCGACACCT GTCTGCGGCA GGTGGCCTAC GATGCCAAGA CCGGCACCTT CGATATCGAC AAGGTCGCGA CCGGGATCTC CAAGGGGAAG CGGGACATGA TCCGGATGAT CAAGGATGTG ATCCGGGAGA ACGGCGATGT CAGTGGTAGA GCCCAGATCC AGCAGGTGAT CGACCTCGTC GCCCAGCAGG GGTTCGGCAA GGACGAAGTG AAGAAACAGA TCGATGCCTT CCTCCGGAGT GGCGAAGCGA TGGAGCCCAA GAACGGGGTC ATCAAACTGA TCTGA
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Protein sequence | MSGPEDEFAE ISDRVAEWSR FLKTRYKKEL TELLREYPHK RSLVIDYHQV ESFGKPGLRM ADEILENPGK VIEDLRDAIK TQHVVKTRKN EQIPREINLR FINLPQKICA RDIRSEQINK MLSVEGILRK TTEVRPRIVE AIFRCPAGHM TRRMQEYGRF IEPEQCGTEG CTFRKLQLMA KRSRFIDAQK VRIQESPEGL RGGQQPQTLD VDVTDDITGT VAPGDRVVIN GILRSQQRVT YGTKSTTFDI YLECNSIEVA EKEFEEVNIT EKDEEEIIRL STDPTIYRKI VHSIAPTIYG NEDVKEAIAL QLFGGITKEM PDGSRLRGDI HVLLIGDPGI AKSQILRYVV NLSPRGIYTS GQSSTSAGLT ATAVKDEFGD GRWTLEAGAL VLADMGIAAV DEMDKMQKED RSALHEAMEQ QCYDDQTEIL TEKGWKFFKD LGKNERVASL TQDGFLTYEI PSQHVISDYD GQMYYIKSRQ VNLAVTPNHN MYVNLNKRAN DWEGFKLIRM DELPINKRMR FKKNAKWQGD TVATHTVPGI IKFGNQNCKG YETEPIIVKM DDWLEFLGYF LSEGSVQKHW ETGVPYRVNI SQKIPESTEI IRICLEKLPF NYSYDGANFS INSKQLAGHL VEFGKCHEKY VPAYAKQVPP EQIQILLNAL VLGDGWTRKT TRQTVYITSS KRLADDVTEL LLKIGWSGNI YCQHHAGDTI KDPRGIETRY THGIWEVSFI RDGVNEPNIN TNGEKHIQIK PYSGKIYCVE VPEHLLYVRR DGIPVWCGNT ISVAKAGITA TLKTRCALLG AANPKLGRFD EYADIGEQIN MPPSLLSRFD LIFILTDKPD HKRDEAIADF IIRSHGVGEL IAQHSRDPIE GVTDEYITQQ LAPVTPDIDA GMLRKYIAYA KRTCFPILST EAKETLIAYY MKLRDLADSN KPVPVTARQL EALVRLAEAS ARVRLSKSIE NSDAERVVKI VDTCLRQVAY DAKTGTFDID KVATGISKGK RDMIRMIKDV IRENGDVSGR AQIQQVIDLV AQQGFGKDEV KKQIDAFLRS GEAMEPKNGV IKLI
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