Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2063 |
Symbol | tmk |
ID | 7272044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 2177844 |
End bp | 2178473 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643570675 |
Product | thymidylate kinase |
Protein accession | YP_002467085 |
Protein GI | 219852653 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.615627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCTGA TCACCATCGA AGGGATCGAT GGCGCAGGAA AGAGTTCGCT GGTCCGCCGG CTGAAACATT CGCTCGCCGA CCTGGACCCG ATCTTCACCC GGGAACCGGG GTCGACCTGG ATCGGGGAGT CGGTCAGGCG CGGGATCGCC GAGGAGATCG ATCCGGTGGC AGAGGCGCTC CTCTTTGCAG CTGACCATGC GGCTCACATC GCCCGGGTGA TCAGACCGGG GCTCGCGAAG AACAGGGTGA TCATCTCCGA CCGCTACGTC GACAGCCGGT ACGCCTACCA GTCGGTGATG CTGAAGGGGG TGCTCCCCGA CCCCGGCACC TGGCTCCGTC AGGTGCACCA GCACTGGTCG ATCGCCCCGG ACCTGACCTT TCTGATGGTG CTGCCGGTCG GCACGGCCCT CGCCCGGATC ACCAGGGGAC GGCCGAAAAA AGAGCATTTT GAGCAGACCG CCGTGCTCGA AGCCGTGCAG CAGCAGTACC TGGCCCTCGC CAGGGCCGAA CCATCACGGT TCGTGGTGAT CGATGCAGAA CTGGATCTGG CCGAGGTCCA TCATTTCATG GACCAGACCA TCCGGGAAGC GGTCAGGCGG AACGCTGGAT CGTCACGATC ACATCCCTGA
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Protein sequence | MVLITIEGID GAGKSSLVRR LKHSLADLDP IFTREPGSTW IGESVRRGIA EEIDPVAEAL LFAADHAAHI ARVIRPGLAK NRVIISDRYV DSRYAYQSVM LKGVLPDPGT WLRQVHQHWS IAPDLTFLMV LPVGTALARI TRGRPKKEHF EQTAVLEAVQ QQYLALARAE PSRFVVIDAE LDLAEVHHFM DQTIREAVRR NAGSSRSHP
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