Gene Mpal_1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1879 
Symbol 
ID7272696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1995062 
End bp1996393 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content60% 
IMG OID643570494 
ProductAIR synthase related protein domain protein 
Protein accessionYP_002466907 
Protein GI219852475 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1973] Hydrogenase maturation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTTG AAGAATTTGT CAGACGCAGA GTAGATCAGG GTCTTGATAG AGCAGCAATC 
ACTGCTGCTC TTCAGCGTCA TATCATGGAG ATCAAAGGGG TGGACCAGCC CTATGCAGAA
GCCTTTGCAA AAGCCGTCGT GACCGAAGTG GAGCAGACCT GCGGCCTTCA GGGCGATCTC
TTCACCTTCG CCCCTGCCGG CGTCACCATG GGAGAGTTCG GTGTCGGGTC GCGGGGGTCA
GGCGACTTCT TTGCACATAG ACAGCTGGCG CGGATCATCG GCAGTACCTC GGCATCGGTC
GGTGTCGACG AGATGGACGA CGCCGGGGCG GTCACGGCCG ATGGAAAGTA TATCATCTGC
ACCGTCGATG GCATGCACTC GCGCCTTTCT GACTTTCCGT TCCTGGCCGG GTTTCACGTG
ACCAGGGCCA CACTTCGGGA TGTCTACGTG ATGGGGGCCC GACCGGTCGC CCTCTTCTCA
GACATCCATG TGGCCGATGA CGGGGATGTG GCAAAGATCT TCGACTACAC CGCAGGCATC
ACCTCGGTCG GTGAAGCGAT GGACGTTCCG CTGGTCACCG GTTCGACGCT CCGGATTGGG
GGTGACATGG TCCTCGGATC CAGGATGACC GGTTGCGTCG GCGCTGTCGG GGTCGCTGAA
CACCTGACCG CACGAAAGGC GACGGCACCA GGGGATCTGC TGTTGATGAC CGAAGGAGCG
GGTGGAGGTA CGATCGCCAC CGCCGCCCTC TATTCCGGCT TCCCCGAGGT GGTCGAGGAG
ACGATCAACC TCAACTTCCT GCAGGCTTCG GAGGCCATGA TCAGATCCCC GGTCCTGCAG
AGTGTGCACG CGATGACCGA TGTCACCAAT GGCGGACTCC GTGGGGATGT CTACGAGATT
GCAGAGACCG CCGGTTGCCG GATCGTCGTC GACGGAGATA AAACCAAAGA TCTGGTCGAA
CCGCATGTCA GGGGGATGCT CGATGCACTC CAGATCGACT ACCTCGGTGT CTCCCTCGAT
GCACTGCTGA TCATCGCCCC GCCCGAGGCC GCCCCTGAGA TCAGCCGGGT GATCCGGAAC
GCCGGCGTCA GAATTGCAGA AATCGGTCAT GTCGAGAAAG GACCGGCCTC ATCGGTGCTG
ATGATCGATG GAAAAGAGCA TGGTTTTGAT CCGATGTTCA GGGAATCTGC ATACACACCC
TTGAAGAAGG TCGTCGACCG CCCGGGACGG GATGTCGAAG AGATGCAGGA GGCGGTGCGG
CAGGCAGCCA CCGCAGCAAT GGAGAAGAAG GAACGGGTGC TCGGACGGTT GCTCAAACCA
TCCGCCCCCT AA
 
Protein sequence
MDVEEFVRRR VDQGLDRAAI TAALQRHIME IKGVDQPYAE AFAKAVVTEV EQTCGLQGDL 
FTFAPAGVTM GEFGVGSRGS GDFFAHRQLA RIIGSTSASV GVDEMDDAGA VTADGKYIIC
TVDGMHSRLS DFPFLAGFHV TRATLRDVYV MGARPVALFS DIHVADDGDV AKIFDYTAGI
TSVGEAMDVP LVTGSTLRIG GDMVLGSRMT GCVGAVGVAE HLTARKATAP GDLLLMTEGA
GGGTIATAAL YSGFPEVVEE TINLNFLQAS EAMIRSPVLQ SVHAMTDVTN GGLRGDVYEI
AETAGCRIVV DGDKTKDLVE PHVRGMLDAL QIDYLGVSLD ALLIIAPPEA APEISRVIRN
AGVRIAEIGH VEKGPASSVL MIDGKEHGFD PMFRESAYTP LKKVVDRPGR DVEEMQEAVR
QAATAAMEKK ERVLGRLLKP SAP