Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1877 |
Symbol | |
ID | 7272694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 1992271 |
End bp | 1994001 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643570492 |
Product | lipolytic protein G-D-S-L family |
Protein accession | YP_002466905 |
Protein GI | 219852473 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCACA GACACTCTCT TGTATGTCTC ATTGCAGGGT TGATCCTCTG CATGATGCTC GTAGGGGCGG CAGGTGCAGG TACGCCTGTA AAGATCATGC CGCTCGGTGA TTCGTTGACG CAGGGGTCAA ATCTGACCCC AGACCAGGCA TCTCATCCGA CCTATCGGTA CTGGCTCTGG AACGGGCTGG TCTCTGCAGG TTATCAGATC GATTATGTCG GAAGTGCCCG TTCAAACTTT ACCTATCAGT TTGACCAGGA TCATGAGGGA CATGCCGGGT ATACCACTGA TATGATTTTG AACGGGAACC GTTCTGACTC GGCGAGTGGA AACCTGACCA CCTGGCTCTC GTCATACTCA CCTGATATCG TCCTGCTCTC ACTCGGTAGT GAAGATCAGG TGGCAGGGGT TCCGCTGAAC CAGACCCTGC AGAATGTTGC CCTGATCGTC AACCAGCTCA GGACCCGGAA CCCGTCGGTT AAGATTCTGG TCGGCACTGT TCCACCATCG ACCGTGTACC GTCAGAGTGT CCAGACGATC AATGATGGTC TTGCTGTAGT GGCCGCTGCC CAGAATACAT CCAGCTCTCC GGTTACGCTG GTGGATCTCA CGACCGGGTA CGATGGTACC ACCGATAATC AGGCGGGCAG TATCCTGCCC AATGAGAGTG GCGAGCGGAA GATAGCACAG CGCTGGTATA ATGCCCTGGT TCCCCTCTTA CCCTCCTCTA CCCTGGCTCC TACGCCCGTT ACAACGATCG AAACCCAGGT TACTGTGACC ACTTCATCCG GGAACCCGGC GGTGATCCCC TTTGCAGGTG CTACCATTTA TGCCGGTGAG CAGAGCCTGA ACATATCAGC TACCGGTGTT GCCGCAGGAA CCACCCTCGG GTGGTTTAAG CCCGGAGTCC GTCCGTCCAA CATCACTCCA GACGATTCGC TAGTCGTCGA CAACCCGATC AGTTTCACGG TGCCGGCTGG TACAAAGAAC GGCATCTGGT ATGATATGAC CCGGATGGTT CCGGCCTTTA CAGTCAGGGA TCCGTCAGTG GGGGTCAGGG TCATCGATCT CCAGCGCAAT GTCGATATCA CCGGGCAGAC GATCAACGCT TCGACCCCGG TCGGGTTCAT CCTGGATACA AATCTAGAAT CCTTCACGCA GCGAGGAGCT TCTGCGCAGG TGACGATCCG TGTGCAAAAT CCTGCCGGGC AGATCTATCG GGGTTTGATC GACGACCACG GCATGGTGAA CTGGCTGAAC AATATTAGCG TCACCACCAA CCCCTTCTCG GTGAAGGGGG CAGGTTCCTA TGGGTCCCTC TGGAACACCG GGGATCTGAA TTATACAGCC GGTCAGTACC AGATCTGGGC AGAGACGAAC GTGAACAACA TCAAGGAGAG TTATCTGCAG AGTGATGGCA GTTATTCACT TGGTATGGCG GTATCGGTGC CGGTCATCCT GACCATCGGG ACCAACGGGG TGAATCTCAC CAATACAACA TCTCCTGCCG GGAACCTCTC TGGAACGATA ACACAGAACA TGAGCATGGT GAACGGGGCC GCTACGCATG TAGCAGTCAA TAATTCCTCG GCCCAGCAGG AGAACACCTC CTCTGGACCG TTATACCTGA CCTATACCAT CGTTGCGATT GCGATCATCC TGCTGATCGT CGGCCTCACC CGCCCACGCA AGCCCAACCG CCGGCGTGGT GGCAACAACA GGGATCTCTG A
|
Protein sequence | MNHRHSLVCL IAGLILCMML VGAAGAGTPV KIMPLGDSLT QGSNLTPDQA SHPTYRYWLW NGLVSAGYQI DYVGSARSNF TYQFDQDHEG HAGYTTDMIL NGNRSDSASG NLTTWLSSYS PDIVLLSLGS EDQVAGVPLN QTLQNVALIV NQLRTRNPSV KILVGTVPPS TVYRQSVQTI NDGLAVVAAA QNTSSSPVTL VDLTTGYDGT TDNQAGSILP NESGERKIAQ RWYNALVPLL PSSTLAPTPV TTIETQVTVT TSSGNPAVIP FAGATIYAGE QSLNISATGV AAGTTLGWFK PGVRPSNITP DDSLVVDNPI SFTVPAGTKN GIWYDMTRMV PAFTVRDPSV GVRVIDLQRN VDITGQTINA STPVGFILDT NLESFTQRGA SAQVTIRVQN PAGQIYRGLI DDHGMVNWLN NISVTTNPFS VKGAGSYGSL WNTGDLNYTA GQYQIWAETN VNNIKESYLQ SDGSYSLGMA VSVPVILTIG TNGVNLTNTT SPAGNLSGTI TQNMSMVNGA ATHVAVNNSS AQQENTSSGP LYLTYTIVAI AIILLIVGLT RPRKPNRRRG GNNRDL
|
| |