Gene Mpal_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1790 
Symbol 
ID7270336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1881669 
End bp1882013 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content55% 
IMG OID643570405 
ProductDNA polymerase beta domain protein region 
Protein accessionYP_002466819 
Protein GI219852387 
COG category[R] General function prediction only 
COG ID[COG1669] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATGGA GAGATCTGGA ACCAATGGAG GGATTGAACA CCATGGACCC GGAAACCGAT 
ATCACGCAGC TCCTTCTCAG AAAACGGGAT GAGATCATCT CGATGGCAGA GCAAAGAGGA
GCCAGAAATA TCCGAATCTT TGGATCCATT GCACGGAACG AAGCCCGTCC TGACAGTGAT
ATCGATCTCC TGATCGACCT GGACCCGGAT CGGAGTCTTC TGGATGTCGG GGGTCTTGCC
ATGGATCTTT CACGGCTGCT CGATCGACCG GTCGACATCG TGACCGAAGC AGGACTCCGG
GACCGGATAC GTGCACGGGT GTTGCGGGAA GCACGGGCCT TATGA
 
Protein sequence
MQWRDLEPME GLNTMDPETD ITQLLLRKRD EIISMAEQRG ARNIRIFGSI ARNEARPDSD 
IDLLIDLDPD RSLLDVGGLA MDLSRLLDRP VDIVTEAGLR DRIRARVLRE ARAL