| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1725 |
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| Symbol | |
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| ID | 7271288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1794985 |
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| End bp | 1795869 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643570339 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_002466755 |
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| Protein GI | 219852323 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATAC GAGTAGGAAC CAGAGGCAGT GCGCTGGCAC GGGTCCAGAC CGAGAAGGTC
TGCTCCATGC TGGCCTCACG GGGCATCGAG ACTGAGACTG TGGTGATCAC CACTCATGGT
GATGCCGTCA CCGGCGTTCC CCTCCATGAG ATTGGGGGGC AGGGTGTCTT TGTACGGGCG
CTTGACGACG CCATCGAGGC GCAGGAGATT GACTGTGCAG TCCATAGTCT CAAGGACGTC
CCCGCTCTTC GTCCGCCAGG TGTACTCACC TGTGCCGTGC TCAAGCGGAA CTCCCCGGCT
GATTTTCTTG CGGTCGATGC GGTGGAGAAT CCACAGATCA TCGGGTCTTC AAGCACTCGC
AGGCGTGCAC AACTCCTTCG GCATGATCCA TCCCTGGAGG TGAAGCAGCT CCGCGGCAAT
GTCGACACCA GGATTCGAAA ACTGAAGGCT GGTGAATATG ATGGGATCGT CCTCGCCGAA
GCAGGCCTTC AACGGCTTGG TCTCTCGCTC AAAGGAAAGC GGCTGCCAGT CGATGAGTTT
GTTCCATCCC CCAATCAGGG CACGGTGGCT GTGGTCTGCA GAGAGGATCC GTCCCTGATC
GAGACCCTGG CCTGTGCCCT CGATCATGAG GGGACACGGC AGGATGTGGT CTTCGAGCGG
GCTGTGATGG AGGAACTCGG TGGCGGCTGT TTCGTTCCGG AAGGGGTCTA TTGCAGGGAC
GGCCACCTGA TCGCCGAGGT GCTGGCACTG GACGGTTCGC GTTATCAACG GATCGAGGCT
GATCCGTCCG ATGTCAGAGA GGCGCGTGAG ATCGGAAGAA GATTGAAGGT ACAGGCGGCT
GATCTGATCA GCGACGCGGT CAGAACACTG GGGTTGGAAG AATGA
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| Protein sequence | MSIRVGTRGS ALARVQTEKV CSMLASRGIE TETVVITTHG DAVTGVPLHE IGGQGVFVRA
LDDAIEAQEI DCAVHSLKDV PALRPPGVLT CAVLKRNSPA DFLAVDAVEN PQIIGSSSTR
RRAQLLRHDP SLEVKQLRGN VDTRIRKLKA GEYDGIVLAE AGLQRLGLSL KGKRLPVDEF
VPSPNQGTVA VVCREDPSLI ETLACALDHE GTRQDVVFER AVMEELGGGC FVPEGVYCRD
GHLIAEVLAL DGSRYQRIEA DPSDVREARE IGRRLKVQAA DLISDAVRTL GLEE
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