Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1681 |
Symbol | |
ID | 7271244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 1739131 |
End bp | 1740336 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643570298 |
Product | putative transcriptional regulator, GntR family |
Protein accession | YP_002466714 |
Protein GI | 219852282 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTACA CTTTCGCCTC CAGAATGGGA AAGACCCCCC GGTCATTCAT CAGGGAGATC CTTAAAGTGA CAGAACGTCC CGAGGTCATT TCATTTGCTG GGGGACTCCC AAATCCGGCT TTGTTCCCTG TTGAGAGGCT GGCTGAGTCT GCAAGGGCGG TTATCACGGG TGAGGGATCG GCTGCTCTTC AATATGCCAC CACTGAAGGA TATCTTCCTC TGCGCGAATG GATCGCTGAA CGGTACAAAA TTCGGCTTGG TATGGATGTA TCCCCTGATG AGATCCTGAT CACTAACGGT TCACAGCAAT GTCTGGATCT TATCGGAAAG GTCTTCATTG ACCCGGGTTC CCGGGTTGCA ATCGAACGAC CTGGCTATCT TGGGGCAATC CAGGCCTTTT CGCTCTATGA GCCAGAGTTC ATGAATGTTC CACTTACTTC AGAGGGTCCT GATCCGACTG TCCTCAACTC TGTTCTTTCT GAGGGGAATC CACGTATCTT CTATGGAGTC CCTAACTCGC AGAACCCTTC GGGAATCACC TGGTCTCTTG AGAATAGGTG CAGAGTCGCC AAAATAATAC AGCGATCAGA GACAATCCTG GTTGAGGATG ATGCATATGG TGAACTCAGG TTTTGCGGGG ATCAGATGCC TGCGATGCGG TCCTTCCTGC CTGATAAAAC CGTGATGACC GGTTCGTTCT CAAAGATCAT CGCTCCGGGG ATGCGGATGG GTTGGGTCTG TGCCCCGTAT GAGATTATGG AACAGATCGT CACCGCCAAG CAGGGAACCG ATCTCCATTC AAACATCTTG AGTCAGCGGA TTATATCTCG GTTCCTGGCT GATTACTCTA TTGACGAGCA TATCAGAGCG ATCACCGATG CTTATGCGCA CCAGCGGGAT TGTATGCTTG CGGCTATAAA TGAGCATTTT CCCAAAGAAG TCACGTGTAC GAGTCCTGAC GGGGGGATGT TCCTCTGGGC TACATTGCCG GATGGATTCT CCTCAACTGA ACTCTTCAAC AGAGCATTGG CAGAGAATGT TGCCATCCTA CCTGGTGTTC CTTTCTATAC CGACGGAGGC GGGGAGTCCA CTATGCGTTT GAACTTTTCA AATGCCAGTG ATGAGCGGAT CTGGGAAGGG ATTGCTAGGC TCGGAAGTGT GCTTCATCAG TATATGCAAA CCGGCAGGAT CGCTGAAAAT AACTGA
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Protein sequence | MQYTFASRMG KTPRSFIREI LKVTERPEVI SFAGGLPNPA LFPVERLAES ARAVITGEGS AALQYATTEG YLPLREWIAE RYKIRLGMDV SPDEILITNG SQQCLDLIGK VFIDPGSRVA IERPGYLGAI QAFSLYEPEF MNVPLTSEGP DPTVLNSVLS EGNPRIFYGV PNSQNPSGIT WSLENRCRVA KIIQRSETIL VEDDAYGELR FCGDQMPAMR SFLPDKTVMT GSFSKIIAPG MRMGWVCAPY EIMEQIVTAK QGTDLHSNIL SQRIISRFLA DYSIDEHIRA ITDAYAHQRD CMLAAINEHF PKEVTCTSPD GGMFLWATLP DGFSSTELFN RALAENVAIL PGVPFYTDGG GESTMRLNFS NASDERIWEG IARLGSVLHQ YMQTGRIAEN N
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