Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1568 |
Symbol | |
ID | 7271113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1616140 |
End bp | 1617909 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643570182 |
Product | putative ATPase RIL |
Protein accession | YP_002466604 |
Protein GI | 219852172 |
COG category | [R] General function prediction only |
COG ID | [COG1245] Predicted ATPase, RNase L inhibitor (RLI) homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATAG CTATAGTACA TCGAGAACGC TGCCACCCCC GAAAATGCGG GACAGAATGT ATCCATTACT GCCCCCGTGT CCGGACTGGC GACGAAACCA TCATCATCGG AGAGAGTAAG AAGGCCGAGA TCTCTGAGGA ACTCTGTGTC GGATGCGGGA TCTGTGTGAA GAAATGCCCG TTCGATGCCC TCGATATCAT CTCGTTACCT GAGGAACTCG AGGTGCCGAC CCATCGGTAT GGCAAGAACG GATTTGCCCT GTACGGGCTT CCCATTCCAG TTCCTGGGAA GGTGACCGGG ATCCTCGGAG CCAATGGTAT CGGAAAGAGT ACCTCGGTGA AGATCCTGAG CGGTTCCCTG CAGCCCAACA TGGGGGACCT GGAGAGCGGA GCCTCCTGGG ACGAGGTGTT GAAGAAGTTT GCCGGCACCG AACTCTTCGA CTATCTGAAG ATGGTTTCGG AGAAGCAGAT CAAAGTCTCC TTAAAACCGC AGTACATCGA TTACATCCCG AAGGTCTTCA CCGGCACAGC AGAGGAACTG CTGAGGACCA CCGATGAACG CGGAAAACTG GACCAGTATG TCTCGGCTCT GAAGTTGGAT GCGATCCTCG ACCGGAAGAT CGACGAACTC TCTGGCGGGG AACTGCAGCG GGTGGCGATC GCTGCCTGCC TCTCCCGGGT CGCCGACTTC TACTTCCTCG ACGAGATCAC CCCGTTCCTC GACATCTATC AGCGGATGGT GACGGCCAGG CTGATACGGG ATCTTGCGGT GGAGAAACCG ATTGTGATCG TCGAGCACGA CCTTGCGATC CTCGACATGC TGGCCGACAC AGTCCATGTC GGTTACGGCC GGCCATCGGT CTTTGGTGTG ATCACCAGGC CCAAGGGGGT CCGGATCGGG ATCAACCAGT ATCTTGACGG GTTCCTGCAC GAGGAGAATG TCAGGTTCCG CGAGTATGCG GTGGTCTTTG ACAAGCGGGC CCATTCGGTT GAAGCGATGC GGAACGTCCT CTTCACGTTC CCACCGATGA CCAAGACCTA TCCTGCCTTC TCGCTCGGTG TGCATGGCGG CGAGGTTCGA CGGGGCGAGG TGCTCGGGGT AGTCGGAGCC AACGGTATCG GGAAGAGTAC CTTTGCAAAA CTGCTGGCCG GGGTCGAAGA GCCTGACGGA GGTCCAAACG ATCTGAAGGT GAAGGTCTCG TTCAAACCGC AGTATGTGAA AGGGGACACC GATGCAACGG TCGAGTTACT GCTCAGGGGA ATTACGAAGA AGTTCGACAG TTCCTACTAC CAGCATGAGA TCGTCGAACC GCTCTCCCTG AATCCGATCC TCCAGTCTCC AGTAAACACT CTCTCTGGCG GAGAACTGCA ACGGGTGGCG ATCGCTGCCT GCCTCTCGAA GGATGCCGAC CTCTACATCC TCGACGAGCC GAGCGCCCAT CTCGATGTCG AGCAGCGGGT CAAGGTGACC CGGATGATCA AGCACCTGGC CGAAGGGCGG GATGCCGGGA TCATGGTGAT CGACCATGAC ATCTATATGA TCGACATGAT CAGTGAACGG ATCCTGGTCT TCGAGGGAGA ACCTGGCCGG CATGGGGAGG CCGCAGGGCC GTTCGATATG CGGGAGGGGA TGAACCGATT CCTGCAGAAC CTCGGGGTCA CCTTCCGGCG GGACAAGACT GGCAGGCCCA GGATCAACAA ACCTGACTCA TTCCTCGATC GTGAGCAGAA GACGAACCGT GAGTATTACT ATTATACCGC TGAAGAGTGA
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Protein sequence | MRIAIVHRER CHPRKCGTEC IHYCPRVRTG DETIIIGESK KAEISEELCV GCGICVKKCP FDALDIISLP EELEVPTHRY GKNGFALYGL PIPVPGKVTG ILGANGIGKS TSVKILSGSL QPNMGDLESG ASWDEVLKKF AGTELFDYLK MVSEKQIKVS LKPQYIDYIP KVFTGTAEEL LRTTDERGKL DQYVSALKLD AILDRKIDEL SGGELQRVAI AACLSRVADF YFLDEITPFL DIYQRMVTAR LIRDLAVEKP IVIVEHDLAI LDMLADTVHV GYGRPSVFGV ITRPKGVRIG INQYLDGFLH EENVRFREYA VVFDKRAHSV EAMRNVLFTF PPMTKTYPAF SLGVHGGEVR RGEVLGVVGA NGIGKSTFAK LLAGVEEPDG GPNDLKVKVS FKPQYVKGDT DATVELLLRG ITKKFDSSYY QHEIVEPLSL NPILQSPVNT LSGGELQRVA IAACLSKDAD LYILDEPSAH LDVEQRVKVT RMIKHLAEGR DAGIMVIDHD IYMIDMISER ILVFEGEPGR HGEAAGPFDM REGMNRFLQN LGVTFRRDKT GRPRINKPDS FLDREQKTNR EYYYYTAEE
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