Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1515 |
Symbol | |
ID | 7271060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1563688 |
End bp | 1565280 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643570130 |
Product | protein of unknown function DUF87 |
Protein accession | YP_002466552 |
Protein GI | 219852120 |
COG category | [R] General function prediction only |
COG ID | [COG0433] Predicted ATPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.649754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.132485 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAATA ACGATGAGAT TACTCAACCG CTCTCCGACA GCCCGACCTA TCGCCTCCTC GGAACGACGG TGCTCGCATA CCGGTACATC ATCCCGCATG ATGCGAAAGT CTTCGTCGGC GATGTCGTCA AGATCACCGA CCGGGAGAAG GGATATATCT TCTTTGCCAA GGTGACCGAC CTGTCCCACT ACACCAACCA CGACGAGCCG CACTGGGATA CGTCCACCTG GGGAGGTCCG CAACCGGGCC CTGACCAGGA CGTCTTCATC GAGGTCCATG CGACGCCGCT CGGCTTCATC GATGATAAAC AGAAATTCCG GTCTATCAGG ACGATTCCAG CCCGGTTCTC GGAGGTCATG ACCCCGAGTG CCGATGATTT TCTCTTCTTA AAAGAGGTGA TGGGGGATAT CGAGGTCGGC GAGATGCGGA CCGGGCTCGG GGTGATCCCG GACGTCAAGG TCGGGATCCC GAGCAAGGTG CTGTCGCAGC ATATGGGGGT CTTTGCAACC ACCGGGATGG GGAAGAGCAA CTTCATGAAG GTCTTCTGCA TCTCCTGCAT GAAGCAGCGG ACGATCGGGA TGCTGGTCGT GGACCCGCAC GGCGAGTATG TCGAAGGGCG TACCGAGCGG TCGGGGGCCC AGACCCGGGG GCTGACCGAT TACCTGCCCG GCCGCGACGG CCTCTCGATC TACTCGGTCA GGCCGAAGGC GGAATGCGAA CGGTTCGGCA TGAAGGAACT CTGCCTGGAG CACGACGACT TCCAGATCAG CGACCTCGGG ATCCTGTACG AACTCTCTCC CCTGCTCTGG GAGATCGTGG AGTCGCTGGA CACCTTCAAA GGGAGCGACG TGATCGATTT CTTCATCAAC GAAGGGGTCG ACTCTCTCCC CTCGGTGACC AAGGTCACCG CCGGGATCGG CCGGCACCCG GAGATGGCAG ACGTCCTGCG GTCTGCCAAT CCCGGCCCCC TCCGGATGAT TCAGCGGCGG ATCGAATCGC TCGTCCAGAG CAACCAACGG TTCCTCGGCC GGCTCGGCTC TTCGATCAAG TCGATCATCG AGGAATTGAA CGAGCAGAAA CTGGTGCTGA TCGACATCCC GGGGATGAGC GAACGGAGCG AACTCTTCAT CCTCTCGGCG ATCACCAGGA AGATCCTGCA TGATCGGGAG AACGCCGTCA ATGCGCCGCA CCCGGACGGT ATCGTTCGGG AACCGTCACA GGTGCTGATC GTCATCGAGG AGGCCCAGCG GGTTCTCTCC GCCGGGGGGA TGAGCACGCA GGTCTTCCGC GAGTGTGCGA TGGAAGGGCG GAAGTTCGGG GTCGGGCTCT GTGCGATCAC CCAGCAGCCG AAGAACATCG ACTCCCGTAT CCTCGCCCAG ATGAACACCT TCGTCGAGAT GGGCCTCTCT GACAAGGACG ACCGGCAGAT CATCGCCGGG TCGGCAAAAC AGGACCTGAC CCCGATGGAC ACCGAGGTGC AGACGCTCAG CAAGGGAGAG GCCGTCATCT CGACGATCGG GATCCCGTTC CCGATCAGTA CCAAGATCCA TCTCTTCCAG GAGTACCTGG ACCAGCTGAA CCGGCAGGAA TAA
|
Protein sequence | MNNNDEITQP LSDSPTYRLL GTTVLAYRYI IPHDAKVFVG DVVKITDREK GYIFFAKVTD LSHYTNHDEP HWDTSTWGGP QPGPDQDVFI EVHATPLGFI DDKQKFRSIR TIPARFSEVM TPSADDFLFL KEVMGDIEVG EMRTGLGVIP DVKVGIPSKV LSQHMGVFAT TGMGKSNFMK VFCISCMKQR TIGMLVVDPH GEYVEGRTER SGAQTRGLTD YLPGRDGLSI YSVRPKAECE RFGMKELCLE HDDFQISDLG ILYELSPLLW EIVESLDTFK GSDVIDFFIN EGVDSLPSVT KVTAGIGRHP EMADVLRSAN PGPLRMIQRR IESLVQSNQR FLGRLGSSIK SIIEELNEQK LVLIDIPGMS ERSELFILSA ITRKILHDRE NAVNAPHPDG IVREPSQVLI VIEEAQRVLS AGGMSTQVFR ECAMEGRKFG VGLCAITQQP KNIDSRILAQ MNTFVEMGLS DKDDRQIIAG SAKQDLTPMD TEVQTLSKGE AVISTIGIPF PISTKIHLFQ EYLDQLNRQE
|
| |