Gene Mpal_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1488 
Symbol 
ID7270093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1535263 
End bp1535592 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content47% 
IMG OID643570110 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_002466532 
Protein GI219852100 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.696737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACG GGCCTATCGA TCCATTAGTC TGCCCCATAT CATATACCAC CTCTATTGTC 
GGAGGGAAAT GGCAATGGGT GATACTCTGG CTGATATATT CCGAAAAAAT ACAACGATAC
GGACAGTTGA AGAAACGGCT GCCGACGATT TCGGATAAAG TATTAAGCCA GCAGTTACGC
ACCCTTGAAC ATGAGGGTTT AATCCATCGC CAAGAATATC CGGAAATACC GCCCAGAGTA
GAATATTCCT TGACGGAAAA AGGGAAAAGC CTGCATCCTA TCCTGGAACT TATGGCTGCA
TGGGGATCGC AGCATATACC CCGGGGTTGA
 
Protein sequence
MKDGPIDPLV CPISYTTSIV GGKWQWVILW LIYSEKIQRY GQLKKRLPTI SDKVLSQQLR 
TLEHEGLIHR QEYPEIPPRV EYSLTEKGKS LHPILELMAA WGSQHIPRG