Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1371 |
Symbol | |
ID | 7269976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1410483 |
End bp | 1411646 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643570003 |
Product | aminotransferase class V |
Protein accession | YP_002466425 |
Protein GI | 219851993 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00447816 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.862029 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATTA AACGCCCGAT ATACATGGAT TCACACGCAA CTACCCCTGT CGACCCTCGC GTGTTCGAAG CGATGCTCCC CTATTTCTCC GAGATCTTCG GGAATGCCGG CAGTATCGAT CATAACTATG GGGCGGTGGC TGCTGATGCA GTGAAGAAAG CCCGGGAACA GTGTGCCCAT ATCCTGAACG CTCAGTCCGA GGAGATCATT TTCACGAGCG GGGCGACCGA GTCCGATAAC ATCGCTATTC TTGGTGTTGC CGAGCAGTAC GCTGCTAAGG GCGATCATAT CATCACCTGT GTTACCGAGC ACAAGGCCGT GCTTGATACC TGCAAGCATC TCCAGATGGC CGGCAAATCT GTGACGTATT TACCAGTTGA CCATTATGGG CTTGTCGACC CCGGCCAGGT TGAAGACGCC ATCACCGAGA AGACTGTATT GATCTCCATC ATGGCGGCGA ACAACGAGAT CGGGACGATT GCACCCATCA AAGAGATCGG GGAGATTGCT CACAAACACG GCGTGCTCTT CCATACCGAT GCAGCGCAGG CCGTCGGCCA TATCCCGATG GATGCTAAGG AGATGAACAT CGATCTGCTG TCCTTCTCCG GTCATAAGAT CTATGGGCCG AAGGGGATCG GCGGTTTGTA TGTCCGGGGG AGCAAGCCCC GTGTGAAATT ATCGCCGATT GTCTTTGGTG GCGGGCAGGA GAAGGGGATT CGCTCGGGGA CGCTGAATGT AACGGGTATC GTTGGGCTCG GAGAGGCGCT CGCAATTGCT AGGAAGGAGA TGGGCAAGGA AGAAAAGCGG TTCCGTCAGT GGACAATGCA GATGTTCGAT GCGTTCAAAG AAGCGTATCC ATCGGTGATG TTGAATGGGC ATCCAACCCA GCGGCTTGCT CACAACCTGA ATGTCTGTTT CCCTGGCATC GAGAGCAAGG CATTGATTCA TTTATTGAGG GACGATGTAT CGATATCTGC TGGCTCTGCC TGCACGACCA CGAGCGTTGA GCCATCGCAT GTGTTACTTG CGATTGGACG GACAGTCGAG GAGTCCCACT CGGCGGTGCG ATTTGGATTG GGGAGAGGGA ATTCGGAGAA GGAAGTGGGG TTGGGGATAA AAAAGGTATA CGATTATTTG AAACAATTAG AAAAATTAAA ATGA
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Protein sequence | MEIKRPIYMD SHATTPVDPR VFEAMLPYFS EIFGNAGSID HNYGAVAADA VKKAREQCAH ILNAQSEEII FTSGATESDN IAILGVAEQY AAKGDHIITC VTEHKAVLDT CKHLQMAGKS VTYLPVDHYG LVDPGQVEDA ITEKTVLISI MAANNEIGTI APIKEIGEIA HKHGVLFHTD AAQAVGHIPM DAKEMNIDLL SFSGHKIYGP KGIGGLYVRG SKPRVKLSPI VFGGGQEKGI RSGTLNVTGI VGLGEALAIA RKEMGKEEKR FRQWTMQMFD AFKEAYPSVM LNGHPTQRLA HNLNVCFPGI ESKALIHLLR DDVSISAGSA CTTTSVEPSH VLLAIGRTVE ESHSAVRFGL GRGNSEKEVG LGIKKVYDYL KQLEKLK
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