| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1335 |
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| Symbol | |
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| ID | 7271196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1373795 |
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| End bp | 1377136 |
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| Gene Length | 3342 bp |
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| Protein Length | 1113 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643569969 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002466391 |
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| Protein GI | 219851959 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0784] FOG: CheY-like receiver
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCGTG TCCTCTATGT TGATGATGAG CCGGCACTTC TGGAACTCGG GAAAATTTTT
CTCGAGATGT CAGGTTTTAT CACAGTAGAG ACCGCCCTCT CCGCACAGGA GGGTATCCAG
GTGCTGAACA GAACTGTCTT TGACTGTATC GTCTCCGATT ACCAGATGCC AGGAATGGAC
GGTCTCGCAT TTCTCAAATA CTTACGAGGA GAGCATAACG GGATCCCGTT CATTCTCTTC
ACCGGCCGGG GACGTGAGGA AGTGGTGATC GAAGCGGTGA ACAGTGGTGT GGATTATTAC
CTCCAGAAGG GTGGTGATCC CACGTCCCAG TATGTCGATC TGCAGCATAA GATCAAACTG
TCGATAGAAC GTCGACGTAC TGAAGATGAA CTGAAAGAAT CCCGACAACA GATGACAGAC
ATCATCGACC ACCTGCCGGA TGCCACCTGT GCCGTTGACC TGGATGGGAA GATTATCGCA
TGGAACCGGG CCATGGAGGA GATGACCGGG GTACAAAAAG AGCAGATACT GGGAACAGGG
GATCATTCCT ATGCTCTTCC ATTTTACGGC ACGAGAAGAC CGATCCTCCT CGACCTCATA
TTAAGGAACG ATGAAGAGAC CTGGAAAAAA TATCCAAATA CCTTCAAAGA AGACAATAAA
CTGATCTCAG AGATCTATAT TCCCATCCTC TATGGCGGAA AAGGTGCTTA CCTCTGGTTT
ATCGCCTCTC CGCTCTATGA TACGCACGGC ACCGTCATTG GGGCAATTGA GTCCATCCGG
GATGTCACCG AGCGGAAGCG GCAGGATCAC ATCCTCCATA CCCAGCTGGA CCTTGGTCTT
GCACTCCAGT CGATCAGAGG GCTGCATGAT GCGCTGGAGA TCTGTCTATC TGCAGCGATT
GAGATCTCCG GCATGGATGC CGGGGGCATC TATCTGGTCG ATGAGGTGCA TGGCTCTCTC
GATCTCGCTG TTTCACGGAA TCTCGGGGAC GAGTTCGTAC TAAGTGTCTC CCATTATTCG
GCAGATTCCC CCAATACCCG GATAGTGATG ACGGGAAAAC CGATCTATAT CCAGTACAAA
AAAACAGGGA TCGTCCATAG TCCAGTCCAG GAACAGGAAG GTCTGAAGGG GTTAATAATC
ATCCCGGTCA TGTCCATGGG TAGGGTGATC GCCTGTATCA ATATTTCCTC CCATATTTTT
GACGAAATCC CGGCAAATTC CCATATTGGC CTTGAAACGA TCGCTACCCA GATTGGGGCG
GCCATCGTGC GAATCCAGGC GGACGAAGCG CTTGCACAGA GCGAGCAGAA GTACCGGAAC
GTGGTCGAAG ACCAGACTGA ATTTATCTCC CGTTTCTTAC CGGATGGAAC GCACGTCTTT
GTCAACGAGG CATACTGCAG GTATTTCCAA AAGTCGTCTG CTGAGATCAT CGGGACGACG
TTCACTCCGC AACAGCCTGC AGAAGACCAG AAAGCGGTAC GGCAGCACAT CAGGGGATTG
ACACAGGAGA AGCCGGTAGC AACGATGGAA CACCGGATCG TCATGCCGGA CGGGCAGATC
AGATGGCAGC AATGGAGTGA CCGGGCGATC TTTGATGAGG ATGGGGATCT TGTAGAATAC
CAGTCAATCG GACGGGACAT CACCGATAGG AAGATGGCCG AGGACGGACT GAATACCGCC
TATAAGCAGA TCACGGCAAC AGAAGAAGAG TTGCGTGAAC ACTATGACAA ACTGAAAAAT
AGTGGGGATG CACTCCGTGA GAGTGAAGAG AAATACCGGA GCATTCTAGA AAATATTCAG
GATGTCTACT ACCGAAGCGA CACTGCGGGA AACCTCATAC TGGCAAGCCC CTCTGCAAAA
CAACTGTTAG GGTACGACTT AGAATCAGAG GTGAAAGGGA AGAATATTGC GCAGTCTCTC
TATTACTATC CGGAAGAACG CGAAAAATTC CTTGCAGAAC TGGACAGCAG GGGATCAGTC
ACCGATTATG AAGTCACGTT GAAAAAGAGG GACGGAACAC CGGTACCTGT CTCCACGAGC
AGTCATAACT ACTATGATGC AAACGGCAAT CGCCTCGGTG TTGAGGGAAT CTTCCGGGAC
ATCACAGAAC GTAAGAAGAT GGAAGATTCG CTCAAAGCAA ATGAGGAGAA CTACCGATCT
CTGGTTGATA ACCTCAATGT GGGGGTCTAC CGGAACACCC CAGAATTCCC TGGCAGGACG
ATCTGGGCGA ACCAGGCATT TGTCAGGATA CTTGGATATG ATTCTTTACC TGAACTGTTG
GAACACCCGG TCGCCGATAT CTATGCCAAT CAGGATGAGC GGAAAAAGAT CATTCAGGTC
CTGGATACAG AGGGTTCTGT CAGGGACAGG GAACTGCACC TGAAGAAGAA AGACGGTACG
CAGATCTGGG TTTCAATCAA TGCACAGACA AAAAAGAAGT CGGATGGGAC GATTGAATGG
ATTGACGGGA TCTGTGACGA TATCACTGCA TTAAAGGAAG CAGAGGAGAA GGGCAGGCGA
TATCAACTCG AGATATCAAG GACCATTGAT TACCTGCCTG ATGCCGCCTT TATAATCAAC
CGGAAGGGAA CGGTTATTGC ATGGAACCGG GCGATTGAAG AGATGACCGG GGTCAGAGCA
GAGGAGATCG TCGGCAGGGG AGACTATGAA TATGCCATCC CGTTTCATGG ACACCGCCGG
CCGATCCTGA TCGATCTTAT CTTTGCATTA GAGGATGCAG TACAAAAAGG AGATTACGTT
GAGATAAAAC GGACCGGGGA GATCCTCTCC GTCGAGAGTC CCAATCTGAT ACTCAAAGGT
AAACCTTCGA TTGTAAGGGC CATTGCAGCT CCGATCTATG ACGAATCCGG AAATGTCGCT
GGTGCCATCG AAACGATCAC TGATATCACC GAATTAAAAC GGGCTCAGGA AGATCTTCGG
GTGTCGGAGA ACAGATATCA TACCATCTTT GAGAACACCG GAACTGCTAC CGTCCTCCTT
GAGGAGAACA CCACAATATC CCTGGCCAAT GCTGAATTCG AGCGACTGTC TGGATATTCA
AGAGAGGAGA TTGAGGGGAA AATGAGCTGG ACTGAATTTG TTTTTCACGA GGATCTTGAG
AGAATGTTCA CCCAGCACCA CCTGCGTCGG GAGAGGAATG AGACTGCCCT GAGACATTAC
GAGTTCCGGT TTATTACAAA GACAGGTGAG ATCCGCAGTA TCGTCCTGAC CATTGATGTA
ATTCCGGGCA CGACGCAGTC TGTTGCTTCC TTAATGGATA TCACCGCCGA GGTCCGTGCA
TCGGACGCCG TGAAACTGGC GAACAAACAC TCGATCTCAT AA
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| Protein sequence | MYRVLYVDDE PALLELGKIF LEMSGFITVE TALSAQEGIQ VLNRTVFDCI VSDYQMPGMD
GLAFLKYLRG EHNGIPFILF TGRGREEVVI EAVNSGVDYY LQKGGDPTSQ YVDLQHKIKL
SIERRRTEDE LKESRQQMTD IIDHLPDATC AVDLDGKIIA WNRAMEEMTG VQKEQILGTG
DHSYALPFYG TRRPILLDLI LRNDEETWKK YPNTFKEDNK LISEIYIPIL YGGKGAYLWF
IASPLYDTHG TVIGAIESIR DVTERKRQDH ILHTQLDLGL ALQSIRGLHD ALEICLSAAI
EISGMDAGGI YLVDEVHGSL DLAVSRNLGD EFVLSVSHYS ADSPNTRIVM TGKPIYIQYK
KTGIVHSPVQ EQEGLKGLII IPVMSMGRVI ACINISSHIF DEIPANSHIG LETIATQIGA
AIVRIQADEA LAQSEQKYRN VVEDQTEFIS RFLPDGTHVF VNEAYCRYFQ KSSAEIIGTT
FTPQQPAEDQ KAVRQHIRGL TQEKPVATME HRIVMPDGQI RWQQWSDRAI FDEDGDLVEY
QSIGRDITDR KMAEDGLNTA YKQITATEEE LREHYDKLKN SGDALRESEE KYRSILENIQ
DVYYRSDTAG NLILASPSAK QLLGYDLESE VKGKNIAQSL YYYPEEREKF LAELDSRGSV
TDYEVTLKKR DGTPVPVSTS SHNYYDANGN RLGVEGIFRD ITERKKMEDS LKANEENYRS
LVDNLNVGVY RNTPEFPGRT IWANQAFVRI LGYDSLPELL EHPVADIYAN QDERKKIIQV
LDTEGSVRDR ELHLKKKDGT QIWVSINAQT KKKSDGTIEW IDGICDDITA LKEAEEKGRR
YQLEISRTID YLPDAAFIIN RKGTVIAWNR AIEEMTGVRA EEIVGRGDYE YAIPFHGHRR
PILIDLIFAL EDAVQKGDYV EIKRTGEILS VESPNLILKG KPSIVRAIAA PIYDESGNVA
GAIETITDIT ELKRAQEDLR VSENRYHTIF ENTGTATVLL EENTTISLAN AEFERLSGYS
REEIEGKMSW TEFVFHEDLE RMFTQHHLRR ERNETALRHY EFRFITKTGE IRSIVLTIDV
IPGTTQSVAS LMDITAEVRA SDAVKLANKH SIS
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