Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1329 |
Symbol | |
ID | 7271190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1364412 |
End bp | 1366745 |
Gene Length | 2334 bp |
Protein Length | 777 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643569963 |
Product | CheA signal transduction histidine kinase |
Protein accession | YP_002466385 |
Protein GI | 219851953 |
COG category | [K] Transcription [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGTC ACGAGATCGA ATTTTTAAAG AGGCTGCTGG TCACCTACCG CACCGAGGCT CAGGAGCATC TCGCCACCCT CTCTTCCCAG CTGGTCGAAC TGGAGGCCAG CAGGGATGAC CAGGTGAAGT CTCGGGAGAT CCTGGAACTG GTCTTCCGGG AGGCGCACAG TCTGAAGGGC GCCTCCAGGG CGGTGAACCT GGTCCAGGTC GAGAGGGTCT GCCAGGCGAT CGAGAGCGTC TTCTCGGTCC TCAAACAGCA GAGCGCCTCC CCGTCAAAGG AGCTCTTCGA TCTCTTCTCT GAAGTCATCG ACACCGTCAG GACGATGGTG GCGGCCGCCG ATCCCCAGGT CCCCCAGCCC GAGAGTCCGC AGACGAAGCG GTTGATCGCC CGTCTCGAAC ACCTGGCCAG AAACGTTGCA GCCACTCAGG CAGGGCCTGC AGCGAATGTC GCGACCGGGA TAGAACCCCT GGAGGGAACG GCCGGCGGCG GCACCCCGGG GACCCTCGAG GGGATCGGGC CTGTCAGAAA GGCAAAGGAC GAGGTGGTGC CGGAGACGAC CGTCAGGATC TCCGTCGATA AACTCGAACG GATCCTCCAC CAGGTTGAGG AGTTCCTCCT CCTGAAGCTG GCGGTAAACG ACCAGTTCAG TGAACTGCAG AGGATCCAGG CCCTGGTTGA GTCCTGGAGC GACGAATGGA CGCGCGTTTC CTCCGACCTC GTCACCCTCC GCCAGGTCAC CGGTGCTGCG TCATCTGAAC GACTTGAACG GGTCCAGCCT TTCATCGAGC GCCAGCTGAC CTTCCTTGAC TGGAACCACC AGTTCATGCG GTCCCTGGAC GGGGGTTTGA ACGGATCGAT CCGTTGCATG GATCGGGGCC GGCGATCCCT CGAGACCCTG GTCGACACTC TCCTCGATGA CATGCGGGAT GTCCTGATGC TTCCTGCTTC TTCCCTGTTT GATTCATTCC CGCGGTTGGT TCGGGACCTT GCACAGGCCC TGGGCAAGGA GGTGCGGCTC GAGATCCGGG GGAGCAGCAT TGCGATCGAT CGCAGGGTTC TGGACGAGAT GCACGACCCG CTGATCCACC TGCTGCGAAA CGCGATCGAT CATGGGATCG AACCCCTCAC AATACGGAAG GAGCAGAAGA AGACCCGGTA CGGACAGATT ACGATCGAGA TCGAGCTTCG GAGCGGGAGA CAGGTGGGGA TCACGATCGC TGATGACGGG GCCGGCGTCG ATCTCCCCCA GGTAAAGCGG GCGGCGGTGA AGGGGGGTCT CATCTCCGAA CGGGAGGCCG AGCGGATGAA CGATCAGGAG GTGACCAACC TCCTCTTTCG GTCAGGGATA TCGACCAGCC CGATCATCAC CGATCTCTCC GGTCACGGTC TCGGCCTGGC CATCGTGCTT GAGAAGGTCG AAAAACTGGG CGGGAGCGTG ACCGTCGAGA GCACCCCTGG TGCGGGCACA TCCTTCCACC TGCTCCTGCC GCTCACCCTG GTGAAATTCA AGGGGGTGCT GGTCACTCAG GATAACCGGT CGTTCGTCTT CCCGATGGCC TATGTCGAGC GGACGCTCCA GGTGTCGGTA GAATCGATCG CAGCGGTCCA GAACCACAAG ACCCTGCTGT ACGAAGGGGA GTTCATTCCA GTGGTGAGGC TCGGCAGCGT CCTGGAACTC CCGGATCCCC CTATGAGGGA GGCACAGACG AAGGTCTCGA TCGTCGTGGC ACGGGCCTCG AAGACCAGGA TCGGGTTCTC GGTCGACGAA GTCCGCAATG AACAGGATGT GCTCGTCAAG AGCCTTGGAA AACAGCTCTC GCGGGTGCGG AACATCTCTG GAACCACGGT GATCGGCAAT GGGACACTGG TACCGATCCT GCATGTACCG GACCTGATCA AGTCGGTGTT GAAGCCCGGG GCCGGGGCGA GGTATGGCCG CGAGGTCGTC GTCGCCGGAA GGCTCCCCTC TTCCATCCTG GTGGCCGAGG ATTCGATCAC CTCACGGACC CTTCTGAAGA ACATCCTCGA GTCGGCAGGT TATCGGGTGA CGACAGCGGT CGACGGCCAG GATGCATGGA ACGTCCTGAT CTCCGGGGCC TTCGACCTGG TCGTCTCGGA TGTCGACATG CCCCGGATGA GCGGATTCGA CCTCACCAGA AAGATCCGGA GCGATCAGCG GCATGCTGAC CTGCCGGTGG TCCTGGTCAC CTCCCTCGAC TCTGCAGGTG ACCGGGAACA GGGGATCGAG GTGGGCGCCA ATGCCTATAT CGTGAAGAGC AGCTTCGATC AATCGAACCT GATCGAGATC ATCGATCGGC TGGCAGGACC ATGA
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Protein sequence | MDSHEIEFLK RLLVTYRTEA QEHLATLSSQ LVELEASRDD QVKSREILEL VFREAHSLKG ASRAVNLVQV ERVCQAIESV FSVLKQQSAS PSKELFDLFS EVIDTVRTMV AAADPQVPQP ESPQTKRLIA RLEHLARNVA ATQAGPAANV ATGIEPLEGT AGGGTPGTLE GIGPVRKAKD EVVPETTVRI SVDKLERILH QVEEFLLLKL AVNDQFSELQ RIQALVESWS DEWTRVSSDL VTLRQVTGAA SSERLERVQP FIERQLTFLD WNHQFMRSLD GGLNGSIRCM DRGRRSLETL VDTLLDDMRD VLMLPASSLF DSFPRLVRDL AQALGKEVRL EIRGSSIAID RRVLDEMHDP LIHLLRNAID HGIEPLTIRK EQKKTRYGQI TIEIELRSGR QVGITIADDG AGVDLPQVKR AAVKGGLISE REAERMNDQE VTNLLFRSGI STSPIITDLS GHGLGLAIVL EKVEKLGGSV TVESTPGAGT SFHLLLPLTL VKFKGVLVTQ DNRSFVFPMA YVERTLQVSV ESIAAVQNHK TLLYEGEFIP VVRLGSVLEL PDPPMREAQT KVSIVVARAS KTRIGFSVDE VRNEQDVLVK SLGKQLSRVR NISGTTVIGN GTLVPILHVP DLIKSVLKPG AGARYGREVV VAGRLPSSIL VAEDSITSRT LLKNILESAG YRVTTAVDGQ DAWNVLISGA FDLVVSDVDM PRMSGFDLTR KIRSDQRHAD LPVVLVTSLD SAGDREQGIE VGANAYIVKS SFDQSNLIEI IDRLAGP
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