| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1271 |
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| Symbol | |
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| ID | 7271131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1299999 |
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| End bp | 1300541 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643569905 |
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| Product | integrase family protein |
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| Protein accession | YP_002466328 |
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| Protein GI | 219851896 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0155306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACCGC CCGCTCGTGG ATTTAGTCCG AGACAGGTAA CGGGTGAATC CTTACTGATC
GCTCCGTTCT TCATCCCGGA CGGCGGCCGG ACCAGAGGAG AGATCGAAAT CTCTCTTATC
CAGGATAACT GTCTGAGTAC CAAAGATAAA GCATTGATCT TCACTCTCTA CGAAACGGGG
TGTCGGGTCG GGGAACTCGC CCGAATGGAA TGGAAAGACC TGATATTTGA CGAACTGGTG
GTGAAGGTCT ACATCCATGA CACCAAGAGT AAACAGATCA GGTATAGTCG GATGGTCAGT
GCTAAAGATT GCGTATTGGC CTGGAAAAAC ATTTATCCAG GTCAACCAGA AGGGAATTCT
AAGGTTTTTA TTGATCGTAC CCGTCGGGAG ATTATTGACA TTACTGTGGA TCGCACAATC
AAACGTGCGG CCGACCTCGC CGGCATTACC AAATGGATTT ATGCCCATTT ATTTAGAAAG
TCCCGAGCGA CACACATGGT CGCAGAGGGG TATCAAGAAT CTGTAATCAA GATGTCTCTG
TGA
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| Protein sequence | MRPPARGFSP RQVTGESLLI APFFIPDGGR TRGEIEISLI QDNCLSTKDK ALIFTLYETG
CRVGELARME WKDLIFDELV VKVYIHDTKS KQIRYSRMVS AKDCVLAWKN IYPGQPEGNS
KVFIDRTRRE IIDITVDRTI KRAADLAGIT KWIYAHLFRK SRATHMVAEG YQESVIKMSL
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