Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1250 |
Symbol | |
ID | 7271528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1278218 |
End bp | 1278904 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643569884 |
Product | hypothetical protein |
Protein accession | YP_002466308 |
Protein GI | 219851876 |
COG category | [S] Function unknown |
COG ID | [COG2339] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.361549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.274152 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTCA CCTACCTGGT TGTTCTTGGC TTTGCCCCCG CGCTCTTCTG GGTCTGGTTT TTTTATATGC GGGATCGGTG CAGGTCCGAA TCGCCGACCT GGATGCTCTG GCTCTTCATC CTCGGGATGG TGGCGATACC ACCAGTTGCC CTGATAGAGG GGGCTTTTGA TCCCCTTGTT CATTCTACCG TGTTCATCAG TGTCATAGTG GCCCCGATCG TTGAGGAACT GGCCAAGTTC TTGGTGGTGT ACCTGACAGT TTATAGAAAT CATGCCCTCA CCGATCCAAT GGATGGGATC ATATACTCAA CGACGGCCGC ACTTGGATTT GCAGCCCTTG AGAACTTCTT CTATGTCTTC GGTGCATATC AGGAACTGCT GGTTCTGCCG TTCGAGTTGA GCATCGTTCG AGCGCTTCTT TCAGTACCTG CCCACGCCCT GAACTCAAGT ATGTGGGGGT ATTCACTTGG TCAGGCAGTG GTAGTGCCAC ACGAGGCGAA GAGGCCGATC ATCCTGCAGG GACTCCTGGT TGCGATGTTC TTTCATGCTC TCTTCAACCT GTTACTCACC TTTAATGAAC CCGGGTTTGC CGTGACAGCG CTGGTTCTCG TTCCATTGAT GTGGCTGATC GTCAGCAAAC GGATCAATGC AATGCTGGTT CGAAAATTCT GTGTCCTCAG ACGATGA
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Protein sequence | MDLTYLVVLG FAPALFWVWF FYMRDRCRSE SPTWMLWLFI LGMVAIPPVA LIEGAFDPLV HSTVFISVIV APIVEELAKF LVVYLTVYRN HALTDPMDGI IYSTTAALGF AALENFFYVF GAYQELLVLP FELSIVRALL SVPAHALNSS MWGYSLGQAV VVPHEAKRPI ILQGLLVAMF FHALFNLLLT FNEPGFAVTA LVLVPLMWLI VSKRINAMLV RKFCVLRR
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