Gene Mpal_1222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1222 
Symbol 
ID7271500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1254941 
End bp1255978 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content61% 
IMG OID643569859 
ProductAIR synthase related protein domain protein 
Protein accessionYP_002466283 
Protein GI219851851 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0309] Hydrogenase maturation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0509225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATG AGAAGATCGG GAAGATCGAT GCGGCGACTT TCGCCTCGTT CCTGCTCCAC 
CGAACAGGTG CGGCAGATCC CTCGGTGATC GTGCCGCCGA CTGCGGGGAT CGATGCAGGG
GTGGTCGACC TCGGTAACAA CAGGGTACTG ATCGTGGCCG AGGATCCGAT CTTCGCCATC
CCCAACCAGC CATACGATCT CTTCGGCTGG CACACGGTCC ATATCGGGGC CAGCGATGTC
GCCGTGATGG GGGTGAAGCC GCAGTACATG ACCTATTCAC TGCTGATGCC CCCGGGTACG
CCCGACCAGG ACTTCCGGAC GATCGTGGAC GCGATCGACT TGGCTGCAAA GGATCTCGGG
ATCGCGATCG TCGGCGGACA CACCGGGTAC TATCCCGGGT TCGCCGCCCC GACGATCGGC
GGAATTACGG TTTTTGCGGT GGCAGAGAAA GGGGAGTACA TCACCTCTGC AGGTGCTCGA
CCCGGTGATG ATGTGCTGCT GACCAAGGGG CCGGCGATCG AGACCGCGGC TCTCCTTTCA
GTGCTCCGTG AAAATGAACT GAAGGCGAAG TACCCGGCCT GGCTTGTGAA GGCTGCGCAG
GATCTCTGCT GGCAGATGTC GGTTGTGGCG GATGCGGCCC TCGCCCGTGA GGCTGGCGAG
GTGACAGCGA TGCATGATGC GACAGAAGGC GGGGTGATCG GCGGACTCTT TGAGATTGCA
GCGGCAAGTA ACACCGGGAT GGTGATCGAT GAGGCGCAGA TCATCTATCC GAAAGAGGTC
AGAATGGTCT GTGAGCAGTT CAACCTGGAT CCTCTGGCAT CGATCGCCGA GGGGACGCTC
CTTCTGACTG CAGATCCGTC CAGTTCTGAT GCGATCATCG ACCTCCTGAC CCGGTCCGGG
ATCCCGGTGT CGGTGATCGG GAAGGTCACG GACAATCCTG GGGAGCGGAC GATCCGACGG
GTCGACGGTA CCATTGAAGA ACTCCATATC CCAGAGCAGG ACCCCTTCTG GCCCGTCTTC
TTCGAGAGTA CGTGCTGA
 
Protein sequence
MSDEKIGKID AATFASFLLH RTGAADPSVI VPPTAGIDAG VVDLGNNRVL IVAEDPIFAI 
PNQPYDLFGW HTVHIGASDV AVMGVKPQYM TYSLLMPPGT PDQDFRTIVD AIDLAAKDLG
IAIVGGHTGY YPGFAAPTIG GITVFAVAEK GEYITSAGAR PGDDVLLTKG PAIETAALLS
VLRENELKAK YPAWLVKAAQ DLCWQMSVVA DAALAREAGE VTAMHDATEG GVIGGLFEIA
AASNTGMVID EAQIIYPKEV RMVCEQFNLD PLASIAEGTL LLTADPSSSD AIIDLLTRSG
IPVSVIGKVT DNPGERTIRR VDGTIEELHI PEQDPFWPVF FESTC