Gene Mpal_1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1093 
Symbol 
ID7271010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1131440 
End bp1132465 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content50% 
IMG OID643569729 
Productrestriction endonuclease 
Protein accessionYP_002466162 
Protein GI219851730 
COG category[S] Function unknown 
COG ID[COG4127] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.237705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.32417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTCT GGATGGTTCG CAGTGGCCGG TATGGTGAAC GGGAAGATTT TGCCCTTGAA 
AATAAAGTCG CCGTCATCGG CTGGAATGAA TTGCCGGACC TCTCAAAGAT CGAGACCCGG
GAACAACTGC GAGCACTCCT TGAAAAAACC TATCCAGACG ATAAACCCAA GACTCTCATC
AACTGGGAAA GCCAGATCTG GCGCTTTCTG CATGACATAG CGATCGGGGA TCTGATCGCA
ATGCCCCTGA AGGGCAGGTC TTCTATTGCA TTCGGAAAGA TTACTGGACC TTACAGTTAT
CAAAAGAATT TTCCAGAGAA TGCACGCCAC AGTCGCAAGA TTGAATGGAA AAGAGAGATT
CCCCGCGACA GGTTCGATCA GGATCTCCTC TATTCGCTCG GCGCATTCAT GACCGTATGC
CGGATTCAGC GGAACAATGC CGAAGAACGA ATTCTGGAAT TATTGGAAGG AAAGACTCCA
TCAGGGAAAA TAAAGGCAGG AGAACAAAAA CCCCCAGAAG CCGAGGGGGA TGTTGAGCTT
GTTCTCAATA TTGAGGAGAT GGCAACAGAC CAGCTCCGGG AACTGATCAG CAGGAAATTC
CGGGGCCATG ATTTAACCCG GCTCGTCGGC GCTATTCTTG AGGCCCAGGG ATACACAATA
AGTATCGCGA AACCCGGCGC AGACGGGGGT GTCGACATCA TTGCAGGAAA AGGTGCGCTG
GGGTTTGATC ATCCCCGTCT GGTTGTTCAG GTCAAGTCCA GCGACAGTCC GTGTGATGTG
AAGATTGTAC GGGAACTGCA GGGGGTAATG AAAAATTTCC AGGCTGAACA TGGCTTGCTG
GTATCATGGG GTGGCTACAG CGGGGCGGTG CCAAAAGAGA CGGCAACCAA ATTTTTCGAG
ATCAGACTCT GGAATGCGGA TGATCTCATC CAGATGATCC AGACCAACTA TGATAAAATT
CCTGATGAAA TCAAAGCGGA TCTGCCATTA AAGCGGATCT GGATCCTTGT TCCGGAAGAG
GAGTGA
 
Protein sequence
MTLWMVRSGR YGEREDFALE NKVAVIGWNE LPDLSKIETR EQLRALLEKT YPDDKPKTLI 
NWESQIWRFL HDIAIGDLIA MPLKGRSSIA FGKITGPYSY QKNFPENARH SRKIEWKREI
PRDRFDQDLL YSLGAFMTVC RIQRNNAEER ILELLEGKTP SGKIKAGEQK PPEAEGDVEL
VLNIEEMATD QLRELISRKF RGHDLTRLVG AILEAQGYTI SIAKPGADGG VDIIAGKGAL
GFDHPRLVVQ VKSSDSPCDV KIVRELQGVM KNFQAEHGLL VSWGGYSGAV PKETATKFFE
IRLWNADDLI QMIQTNYDKI PDEIKADLPL KRIWILVPEE E