Gene Mpal_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1004 
Symbol 
ID7271737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1031228 
End bp1032043 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content57% 
IMG OID643569642 
ProductABC transporter related 
Protein accessionYP_002466077 
Protein GI219851645 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1119] ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.675227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.42812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCG CATCACTCAC CAGGCAGCAG ACCTCCCCTC CGTTTCTGGA GTTTGAGAAC 
GTCACTGTCT TCACTGAAGG GAAGAGGATC CTTGACGCGA TCTCAATGAC GATACAGACC
GGGGAGAATG TTGCGATACT GGGGCCGAAC GGCTCCGGGA AATCATCGTT GATCAAGACC
ATCACCAGGG AATATCACCC CGCTTTCCAG AAGGATGGAT ATACCTGCAG GATCTGGGGG
AGGGATCGGT GGAATATCTT CGATCTCCGA TCCCGCCTTG GGATCGTCTC GAGCGACCTG
CAGCAGGCCT TCGCTCAGGA GATGTCAGGG CGGGAGGTGA TCCTCTCAGG GTTCTTCAGC
AGTGTCGGTC TCTTCAACCG CATTGTGACG CCGGCGATGG AGGAGAGAAC AGAGGAGATC
GCTGCATTCC TCGATGTTTC CCACCTGCTG GATCGGTCGA TGACCGGGAT CTCTACAGGC
GAGGCCAGAA GACTGTTGAT TGGCAGGGCG CTGGTTCATG ACCCTGAGGT GCTGATCCTC
GACGAACCGA CGAACAGCCT GGACCTGCAC GCCCTCCACA CCTTTCGGGG CACCCTTCGC
AAGGTCGCCA GGTCCGGTAC CGGGATCGTC CTGGTAACGC ATACGCTCTC GGATATCATC
CCTGAGATCT CGCGGGTGAT CATGATCAGG AATGGACGTG TGTACGGGGC CGGCCCAAAA
GCAACAGTTC TCACCGATCA GCAGATCGGG GAACTCTTCT CGGTCCCGGT AAAGATCCGT
GAAGAGGGCG GGTATTACTA CGTCACCGGA TACTGA
 
Protein sequence
MNTASLTRQQ TSPPFLEFEN VTVFTEGKRI LDAISMTIQT GENVAILGPN GSGKSSLIKT 
ITREYHPAFQ KDGYTCRIWG RDRWNIFDLR SRLGIVSSDL QQAFAQEMSG REVILSGFFS
SVGLFNRIVT PAMEERTEEI AAFLDVSHLL DRSMTGISTG EARRLLIGRA LVHDPEVLIL
DEPTNSLDLH ALHTFRGTLR KVARSGTGIV LVTHTLSDII PEISRVIMIR NGRVYGAGPK
ATVLTDQQIG ELFSVPVKIR EEGGYYYVTG Y