| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0488 |
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| Symbol | |
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| ID | 7271903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 490493 |
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| End bp | 495892 |
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| Gene Length | 5400 bp |
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| Protein Length | 1799 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643569135 |
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| Product | Carbohydrate binding family 6 |
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| Protein accession | YP_002465585 |
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| Protein GI | 219851153 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAC CTGGAACAGT GCAAATACTC ATAGCTCTGC TCCTGCTCCT CTGTCTGATC
GAGGGTGCCG CCGCGGTCAC CGTGGTGGTG GCAGCGCAGG ACAGCAGTGC GCTCTCCAAA
ACATCGGCCC AGTTTATCTG TACCGGATCA GGCGACCAGG ACCAGATCAA GGCAGCGATC
GCATCCCTTC CCTGGGATGG GGGGACCGTG TTACTGAAGG AAGGAACCTA TCACTGCACC
GACAATATCG TGCCCGGAGC CTATACCACC CTCAAAGGGG AAGGGGTCGA TAAGACGATC
ATCGACATCC AGGGATATTA TATGGGTATC AAAGTCGACC AGCCCTACGT CACGCTGGAG
GACTTCACCA TCACCGGCCG CGGATGGGTC AGGATCACCG CCAGCCACAT ACAGGTCAGA
AACGTCGCCG CAAAGGATGA CCTGCTTGGC TACTATCCAG GCAAAGTCGA TGATATGGGG
GCGAACGGGG CATTTTTTGT CTGGGCTGAC AACAGAGTCG TCGAGGATAT CGAGTTCAAC
CAGTGCAGCG CCACCAACAT CGGCACCCAT GGGTTCAATC TGAACGGCCA GGGGACCCCA
AAGATGATCA AGAACATCCG GTTCATCGAC TGTTCGGCGA CCCAGTGCGG GAACGCCGAG
GGATGGCCCT GGGCGACAGG GTTCGACTTC CATGAGAGTA ACGACCTGGT CGACTGCCAG
GTCATACGCT GTGTAGCAAA CAACAACTGG GAATCAGGGT TCCACTTCGA GCCAGGCGAC
AACCAGCAGA ACATCGTGTT GACTGACTGC CTCAGCACCA ACAATGGGCA GCGGAACACC
AATGAGGGGG ATTTCACAGT ACAACCCCCT GTAGCTGCAC ACTTCTATAT GGCAGGGTAC
ACGATCGCGA TGGGGACCAC GTTGAACAAC TGCCGTTCGA TCAATAACAG GAACTATGGG
TTTTATGACG AGCAGAACGG GGACAACGTC TTCAACGGAT GTACTGACGA GGGAAGCGGG
TACGGCTGGA AACTCTGTAA GGACGTCGAA GATGTCCAGT TGAACAACTG TACCTCGGTA
GATGCCCAAA ACTGGGCCCT CTGGATCGCC TATGCACATA ACATTCAGGT CAGAGGATTC
CAGCAGTACA GTGCGGCAGG GAGAACCGAT ATCTCCCCCC AGGTGCAGTC GATACTCGGA
TATTACAAGG GGGAGAGTGC ATACGAGAAG CCAGTAACCG GGTCATACTT CGACATCACC
GCACAGGGGT CAACGCTGCC GATCTTAAAT CTCAACGATG CCTACAACGA TCCTGCCGAT
GGGAACACCT ACTCCTTGAA GACCTCTGAC GCTCCCTATG TAGCACCAGT GGTCACCGTG
ACTCAAAACC CCACTCTGCC CCCTGAGCAG GAGATCAATC CTGTCCCGAT CACCACCCCG
GTGATCCTAG ACCCGTACCC CATCCCGGGA AGGATTGAAG CTGAGAATTA CCTGCCTGGT
GCAGAGGTTG GGTATCATGA CACGACCTCA GGGAATGACG GATCGGTGTA CAGATTCGAT
GATGTAGATG TAGAACGGCT TGCTGATGGC AGTGGGTATG ACGTTGGATT CATCAGATCA
GGAGAATGGC TGAAGTACAA TATATCTGTC CAGACTGCAG GCATTTACTA CCTTGACTTC
CAGGTGGCTT CACCCTTCAG CGATAAATCG TTCACCTTCC AGATCGATGG CACAAATGCC
GGCGGGGTTA CGGTGCCGAA TACTGGTTCG TACGACTCCT ACTCCACCGT CAGGACGCAG
GTGTACCTGG CTGCCGGTAT CCACCAACTC AAGCTCGTCT TCGATAATGC AGACAACTCC
AACCTGGACT ACATCGACGT GCTCTCTGCA TCAGGCGGGT CCCAGACACC CATACCCACC
GTGACCGTCC TTCCGACGAC CACCGCCACG ACACCACCAA CCACACAGAC GATTGTACCA
GTGCTGACGA TGCCAACAAT CCCCAATCAT ACCCTCCCGA CCAAGATCGA GGCCAGAGAC
TTTGATCTCG GCGGCGAAGG GGTTGCCTAT CACGATACCA CCACGGGTAA CCAGGGAGGG
GCTTACCGGC CTGAGGACGT CGACATCAGC CACAGTGCAT CAGAAGGATC CGATGTGGTC
ACCGGGATCA GCGCTGGCGA ATGGGTCAGG TATACAGTTA CCATACCCAG TGGTGGCATC
TACACCGCCT CCTTCCGAGT TGCCGGCATC AACGGCGGTA CCCGGTTCGG GGTACAGCTG
GACGGGGCGG ACATCAGTCT GATCTCTGTG CCTGACACAG GTTCCCTCGA CCAGTTCACC
ACCGTCAAAC GGATGGTCTG GCTTCCCTCG GGGAACCATA CCCTGGAGCT CACCTTCAAC
GATCCGATGG CCATCGAATC GATCGACCTC CAGAGCCTGA CGGCGCCGAC CACACCCATA
CCGACATCCA CTACGCCGGC CCCGACCACC GTTCCAACCG AGACCGTCCC CGTGAACACG
ACGACGCCAG CCCCCACGCA GACCGCAAAC ATAACACCCA ACCAGACACC GTCATCAGGG
GCGTTCATTC AGCACACCTT CCCGACCCGG ATTGAGGGCG AGGACTATGA TTATGGCGGA
CAGGGTGTCG GGTATTACGA CCTGACCCCG GAGGAGGAGA CCCCCCTGTA CAGGAGTGAT
GGTGTCGACA TCAAATACTC ACAGTCCCGG GGGTCCTACT ACGTCACCGC CGACGTCGAC
GGAGAATGGC TCGCCTATAC CGTGACGATC CCGACCAGTG GTATCTATAC CCTGAACTTC
GACCTGGCAG GGAACGGACC CTCAGCCTGT TCGCTTGAGG TGGATAACTC AAGTGTCTGC
TCGATCGTCG GACTGGATAC CGGTTCCATG ACCACCTTCC AGGAGGTCCA GCGGCAGGCC
TGGCTTCCAG CCGGTACCCA TACCCTGAAG TTGAACTTCG CATCCCCAAT GGCAGTGAAC
TATATCGATG CCTGGCTCTC CAACGGGCCA ACCCCAACCT TCACCACCCG GCCGGATGTA
ACCCCACCCG CAACCCCAGT GGTCACCACC CCGGTTGTGA CCCCCACCAC GAACCTGACA
CCCACGGTGA CGATCACCCG GACAACAGAA CCCACCACAA TGGTCCCGAC GACACCAGTC
CAGACCCCGA CCACCGTCAC CACAGCCCCA ACACCGACCA TAACAGCGGC GCCACCCTAC
CAACTCGGGA TGCCACACCA GATCCCATCC CGGATCGAGG CAGAAGATTT CGACCTCGGT
GGCGAAGGGG TAGCCTATCA CGACATAACG ACAAGTAACG ATGGTGGGCA GTATCGTCCC
GACGAAGGGG TCGATATCGA GTATAACCCG ACCGAGCAGA GTTATAACAT CGGCTGGGTC
TTCCCCGGCG AGTGGACCCG GTACACAGTG AACGTAACCG CTGCAGGAAC CTACACAGCA
GACTTCCGAG TCTCGACTGC CTGGAATGGG ATCTCCCTCG TCATGATGCT GGATGACACT
TCAACCCCGC TGACGACCGT CGATGTGCCA AACACCGGCT CCTATGGAAC CTACACAACG
GTCCACAGGA CGGTATACCT CCCTGCAGGC CAGCACCAGA TCAAACTGCT CTACAACGGC
TACGAGAACA TCAACTACAT AGAGTTCACG CCGACAGACA CACCAGTGAC CACGCAGACC
ACGTTGCTGC CAGCCACATC ACCACCCACG ACGACGCCAA CCACCACCGT CCTGACGACG
GCACCGACCA CCATCGGGAC ACCAGGTACC GGGACCACAT CACCCTATCT GCAGCACACC
CTCCCCACGA AGATCGAGGC AGAGGACTTT GACAACGGCG GCGAAGGATA CGCCTACCAT
GACACCACCG CCCTGAACGA GGGAGGGCAG TATCGCCCTG CGGAAGGGGT CGACATCGAA
TACAGCCAGC AGGAGATGAG TTACAATGTC GGCTGGATCA GGGACGGCGA ATGGCTCCAG
TACACTGTAA ATGTGCCAGC CACCGGGACT TACACCACCA CATTCCGGAT CGCAACACCT
GGTCTCGGAC GACAGATCCA GGTCTCTGTC GACGGAAACC CAATCACCAC CGTCGGGATA
CCGACCTCAA ATTCGTTCGA TGTCTATCAG GATGTCGTCG CCCAGGTATC ACTTCCTGCC
GGCACCCATC AGGTCAGACT GCTGTTGAAG GGCGGGTCGA TGAACCTGAA CTATATGACC
TTCGCATCAC CTGCAGGTCC GGTGACCACG CAGACCACCC TGCTGCCGGT CACATCACCA
CCCACGACCC AACCCTCGAC AACCATCCCG ACGACGGTGC CGACCACCCT TGGGACACCA
GGTACCGGGA CCACATCACC CTACCTGCAG CACACCCTTC CAGCGAAGAT CGAGGCAGAG
GACTTTGACA ACGGCGGCGA AGGATACGCT TACCATGACA CCACCGCCCT GAACGAGGGA
GGGCAGTATC GCCCTGCGGA AGGGGTCGAC ATCGAATACA GCCAGCAGGA GAAGAGTTAC
GACGTCGGCT GGATCAGGGA CGGTGAATGG CTCCTCTATA CCGTGAACGT GCCGACCGCC
GGAACCTACA CCACCACGTT CCGAGCAGCC GTCCCTACCG CAGGGGCCCA TATCCAGATG
CAGGTGGACG GAACTACTCT CGCAGACCCT ATCCTCACCA CGACCGGTTC CTTTGATACC
TACGCGGACA CCGTCGTCCA GGTCTCACTC TCTGCCGGTA CCCACACGAT CAAGCTGCTC
CCCGGGGGTT CGATGAACCT GAACTATTTC ACCTTCAGTG CAGTTCAGCA GCCGACCCGG
ACTCCGACAC AGGTAATCTC CACCATCCCG ACGATGCCAC CGACGACTCA GACCCCCACT
TCCACCGTGA CCCAGGCAAC CACTTACAAG GGTACCCCAT TCCGGCCCCA TGTGCTACCT
GCACGGATCG AAGCCGAGGA CTATGATCTC GGTGGTGAAG GGGTAGCCTA CCTCGACACC
ACCACAGGTA ACCAAGGCGG AGCCTACCGG CAGGACGACG TCGACATCGA ATACAACACA
GGCGAACGGT CCTTTGATGT CGGCTGGGTG AGGAACGGCG AATGGCTCAC CTACACTGTC
ACCGCAGGGG CAACAAGAAC CTACACCGGC TCATTCAGGG TTGCAACTCC GACAGCGGGG
AAACAGATCC GGATCACGGT CGATGGCAGT GATGCCGGCG TCGTCACCGT CCCGGCCACC
GGCGGCATAA ACCAGTACAG TACCGTGACC GCCGGGATCC CGCTGACCCC GGGTGTTCAC
CAGATCAGAC TCACGTTCGT CGGCGATGAA CTGAACTTCA ACTACTTTGA GTTGAACTGA
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| Protein sequence | MNKPGTVQIL IALLLLLCLI EGAAAVTVVV AAQDSSALSK TSAQFICTGS GDQDQIKAAI
ASLPWDGGTV LLKEGTYHCT DNIVPGAYTT LKGEGVDKTI IDIQGYYMGI KVDQPYVTLE
DFTITGRGWV RITASHIQVR NVAAKDDLLG YYPGKVDDMG ANGAFFVWAD NRVVEDIEFN
QCSATNIGTH GFNLNGQGTP KMIKNIRFID CSATQCGNAE GWPWATGFDF HESNDLVDCQ
VIRCVANNNW ESGFHFEPGD NQQNIVLTDC LSTNNGQRNT NEGDFTVQPP VAAHFYMAGY
TIAMGTTLNN CRSINNRNYG FYDEQNGDNV FNGCTDEGSG YGWKLCKDVE DVQLNNCTSV
DAQNWALWIA YAHNIQVRGF QQYSAAGRTD ISPQVQSILG YYKGESAYEK PVTGSYFDIT
AQGSTLPILN LNDAYNDPAD GNTYSLKTSD APYVAPVVTV TQNPTLPPEQ EINPVPITTP
VILDPYPIPG RIEAENYLPG AEVGYHDTTS GNDGSVYRFD DVDVERLADG SGYDVGFIRS
GEWLKYNISV QTAGIYYLDF QVASPFSDKS FTFQIDGTNA GGVTVPNTGS YDSYSTVRTQ
VYLAAGIHQL KLVFDNADNS NLDYIDVLSA SGGSQTPIPT VTVLPTTTAT TPPTTQTIVP
VLTMPTIPNH TLPTKIEARD FDLGGEGVAY HDTTTGNQGG AYRPEDVDIS HSASEGSDVV
TGISAGEWVR YTVTIPSGGI YTASFRVAGI NGGTRFGVQL DGADISLISV PDTGSLDQFT
TVKRMVWLPS GNHTLELTFN DPMAIESIDL QSLTAPTTPI PTSTTPAPTT VPTETVPVNT
TTPAPTQTAN ITPNQTPSSG AFIQHTFPTR IEGEDYDYGG QGVGYYDLTP EEETPLYRSD
GVDIKYSQSR GSYYVTADVD GEWLAYTVTI PTSGIYTLNF DLAGNGPSAC SLEVDNSSVC
SIVGLDTGSM TTFQEVQRQA WLPAGTHTLK LNFASPMAVN YIDAWLSNGP TPTFTTRPDV
TPPATPVVTT PVVTPTTNLT PTVTITRTTE PTTMVPTTPV QTPTTVTTAP TPTITAAPPY
QLGMPHQIPS RIEAEDFDLG GEGVAYHDIT TSNDGGQYRP DEGVDIEYNP TEQSYNIGWV
FPGEWTRYTV NVTAAGTYTA DFRVSTAWNG ISLVMMLDDT STPLTTVDVP NTGSYGTYTT
VHRTVYLPAG QHQIKLLYNG YENINYIEFT PTDTPVTTQT TLLPATSPPT TTPTTTVLTT
APTTIGTPGT GTTSPYLQHT LPTKIEAEDF DNGGEGYAYH DTTALNEGGQ YRPAEGVDIE
YSQQEMSYNV GWIRDGEWLQ YTVNVPATGT YTTTFRIATP GLGRQIQVSV DGNPITTVGI
PTSNSFDVYQ DVVAQVSLPA GTHQVRLLLK GGSMNLNYMT FASPAGPVTT QTTLLPVTSP
PTTQPSTTIP TTVPTTLGTP GTGTTSPYLQ HTLPAKIEAE DFDNGGEGYA YHDTTALNEG
GQYRPAEGVD IEYSQQEKSY DVGWIRDGEW LLYTVNVPTA GTYTTTFRAA VPTAGAHIQM
QVDGTTLADP ILTTTGSFDT YADTVVQVSL SAGTHTIKLL PGGSMNLNYF TFSAVQQPTR
TPTQVISTIP TMPPTTQTPT STVTQATTYK GTPFRPHVLP ARIEAEDYDL GGEGVAYLDT
TTGNQGGAYR QDDVDIEYNT GERSFDVGWV RNGEWLTYTV TAGATRTYTG SFRVATPTAG
KQIRITVDGS DAGVVTVPAT GGINQYSTVT AGIPLTPGVH QIRLTFVGDE LNFNYFELN
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