Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0003 |
Symbol | |
ID | 7270115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 2211 |
End bp | 3377 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643568662 |
Product | aminotransferase class I and II |
Protein accession | YP_002465122 |
Protein GI | 219850690 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00871395 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAGGATC GGATATCTGA ACGGGCCCGG GTGATCCCAC CGTCAGGGAT CAGGAAGTTC TTTGATATCG TCCAGACGAT GGACGAAGTG ATCTCACTCG GTGTCGGCGA GCCGGACTTT GTGACCCCCT GGAACATTTG TGAGGCCGCG ATCTACTCGA TCGAGCAGGG GAAGACCTCG TACACCTCGA ACCGGGGGCT TCAGAACCTC CGCGAGGCCC TTGCGGCACG GATGGAGCGG GTATATGCCC TCCAGTACCA CCCTGACCGG GAGATGATTA TCACCACCGG CGTGAGCGAA GGGGTTGATA TCGCGGTCCG CGCGATCGTC GACCCGGGTG ACGAGGTGTT GATTGCAGAG CCGAGCTATG TTTCGTACGC TCCCACAGTG ACCCTGACCG GTGGGGTTCC GATATCAGTG GAGTGTCGAG AGGCAGATCG GTTCAAGCTG AACCCCGATA CCCTCGCCGA AGCGATAACA CCGAAGTCCA AGGCCCTGAT CATCAACTTC CCGACCAACC CGACCGGAGC CGTGATGACC AGGTCCGACT ACCGGGAGAT TGCCGATCTG ATCACCGACC ATGACCTTAT CCTGATCAGC GACGAGGTCT ATGCCGAGCT GACCTATGAA GGGACGCATG TCCCTGCGGC CACGGTCGGT GACCTCTGGG AGCGGACGAT CACGCTGAAC GGTTTCTCCA AGGCCTACGC GATGACTGGC TGGCGGCTCG GGTACCTCTG CGCTCCAGAA GATCTCTGCG ATGCAGCCTT GAAGATCCAC CAGTATGTGA TGCTCTGTGC TCCGATTATG GCCCAGATGG CGGCGAATGA GGCTATTCGA TCTGCAGAGG AGGAGAAGGA CGCGATGATC AAAGAGTACC GGCAGCGGCG GAACCTCTTC GTCGAGGGGT TGAATCATAT CGGCCTCCAC TGCCATCTGC CGGAGGGTGC GTTCTATGCG TTCCCGTCTA TTGCCTCCAC CGGCCTTTCG GACGAGGACT TCGCCGAGCA GTTGCTGCAT GAGCAGCATG TGGCGGTCGT CCCGGGATCG GTCTTCGGGG CTGGCGGAGT TAACCATATC CGCTGCGCCT ATGCGGTCTC ACGGCCGGAC CTGACCGAGG CGGTCAGACG GATCGGTCTC TTCATCGCTG ACCACCAGCG GGCTTGA
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Protein sequence | MKDRISERAR VIPPSGIRKF FDIVQTMDEV ISLGVGEPDF VTPWNICEAA IYSIEQGKTS YTSNRGLQNL REALAARMER VYALQYHPDR EMIITTGVSE GVDIAVRAIV DPGDEVLIAE PSYVSYAPTV TLTGGVPISV ECREADRFKL NPDTLAEAIT PKSKALIINF PTNPTGAVMT RSDYREIADL ITDHDLILIS DEVYAELTYE GTHVPAATVG DLWERTITLN GFSKAYAMTG WRLGYLCAPE DLCDAALKIH QYVMLCAPIM AQMAANEAIR SAEEEKDAMI KEYRQRRNLF VEGLNHIGLH CHLPEGAFYA FPSIASTGLS DEDFAEQLLH EQHVAVVPGS VFGAGGVNHI RCAYAVSRPD LTEAVRRIGL FIADHQRA
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