| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Moth_0365 |
|---|
| Symbol | |
|---|
| ID | 3832721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Moorella thermoacetica ATCC 39073 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007644 |
|---|
| Strand | + |
|---|
| Start bp | 367931 |
|---|
| End bp | 369916 |
|---|
| Gene Length | 1986 bp |
|---|
| Protein Length | 661 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637828300 |
|---|
| Product | TRAG protein |
|---|
| Protein accession | YP_429242 |
|---|
| Protein GI | 83589233 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00756366 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAACA AGATATTTGC CGGTTTGACG GAGAAAACCG GCAACAACGG TATAGGGCTT
TTTTTGTTGG CAGTCGGCTT TATAACGAGC CTGGCGGTAT TGTACATCAT CGACGTGTGG
CTTCTCGGCC CTGTAGCTGC CATCTTTGCG GCAGCTTATA AATGGCTGGC CGGGGGGCTG
CACGGGCATC CCAATTATAC TGCCGCCTGG TGGTACTTCC AGCACCCGGT GGCAACTGCC
AGGGCCTGGC TGGGCGGCCA CCTCTCCCAG CCGGAAGTAC GTTCCTGGTG GTTCGGCCTT
AATGTATTAA TTGCGGTAAT GTGGGCCCTC CGCCGGATAG CCTGGCAATT TGACTGGACG
ATTAGTAAAA ACCCCGGCAT AAAGATAAAA AAAGACGACG CCACCTACGG AAGCGCCAGG
TGGGCCGTGA AAAGCGACCT GGCGCGAGTT TGCGACTTCG GCTTCGGCCC GGGAATAGTT
CTGGGGGCTT TAGGAGCAGC ACCAGTGCGT ATTCCCCCTA AGCCCAAAAC CTGGATGAAC
CGCCATGTAC TCGTGGTCGG CGCACCAGGT TCCGGCAAAA GCCGTGGCTA TGTCCGGCCC
AATATCTTCG CTGCGGTCCG GTCAGGGGAG AGCGTGCTGG TGACGGATCC CAAGGGTGAG
CTTTACCGCA GTATGGCCTG CTGGCTAAAG TCAAAAGGGT ACACGGTTAA GGGCTTCAAC
CTTGTCCAAA TGGGACAATC GGATCACTGG AACCCCCTGG CGGAGATCCG GACCCCCCTG
GATGCCGACG TTTTTGCCCA GGTGGTTATC AATACCACTG AAACTGGACC GAAGAAAGGT
GGCGATGCGT TTTGGGATCG AGCCGAGCAA AATTTATTAA AGGCCCTGGC CCTCTATGTC
ACCACAGAAC TTCCTGCGGA TAAGCGCAAT TTTGGCTCTC TTTATGATAT ATTAGCTGCC
GGTGATTTTG AACAAGTAGA TGCCTTATTC GCCAAACTTC CACCGGGCCA TCCAGCAAAA
GGACCATATA ATGTTTATGC CATGGCCGGC GATAACGTCA AAGGTGGAGT GGTAATCGGG
CTGGGTACAC GGTTGCAAGT ATTCCAGCAA GAAATGGTGC GACGCATAAC TGGTGATAGC
GATATAGACT TAACGTTACC CGGCAAGGGA AAGTGCGCTT ACTTCATCAT TACCCCGGAT
ACTCACGGAG CCTTTGATTT TCTGGCTTCA TTGCTGTTCA CCTTTTTATT CGTCCGGCTG
GTAGAGGTTG CTGATACCTC TCCTAACGGC CGTTTACCGG TGCAGGTCAG ATTTCTCCTG
GATGAGTTTG CCAATATCGT AAGTATTCCG GAGTTTGAAA AGAAAATCGC CACTGTCCGC
AGCCGCGGCC TCGACTGCCA CGTTATAGTC CAGAGCATTC CCCAGCTGGA AAGGAAATAT
GGACGGACCT GGGAGGAAAT AATGGCCTGC TGCGACACGA AGTTAATTAT AGGCGTGAAA
GATGATACTA CCGCTCGCTA CGTAAGCCGT ATGCTAGGGG AAAGTACCGT GGAAACAAGG
AGCTCCACCA GGGAAGTTAA CCCAATATGG GGACAGGGGT TGTTTGACGA CAAGCGTAGC
CTCGGTATTA CCGGCCGGGA ACTGATGACC CCGGACGAGA TCCAGAAAAT GCGCTCAAAG
TTTTGCCTGG TATTCCTCCC CGACGGCACA CCGCCGGCCA AGTTAAAAGT GTTGGATTAT
GAGCAGTTCC CGGAAGCAAA GGAGTTGAAG AAGGTTATAG TTACGGAAAA GAAGGAAGAA
GAAAAAGAGC TTGAGACTGA AGACGAGCTT AACGATGGTG GAAATGAGGA TTACCACGAT
ACCATAGACC GGCAACTTGT AGAAGATGGG GAAGAAAAGT TGATGGAAGA AAACATAAAA
GAGGGAGATA GGGTTATAGT GACAGAAAAT AACACGAGTA ACGGAAAAAT CATTGTCCCG
TGGTGA
|
|---|
| Protein sequence | MFNKIFAGLT EKTGNNGIGL FLLAVGFITS LAVLYIIDVW LLGPVAAIFA AAYKWLAGGL
HGHPNYTAAW WYFQHPVATA RAWLGGHLSQ PEVRSWWFGL NVLIAVMWAL RRIAWQFDWT
ISKNPGIKIK KDDATYGSAR WAVKSDLARV CDFGFGPGIV LGALGAAPVR IPPKPKTWMN
RHVLVVGAPG SGKSRGYVRP NIFAAVRSGE SVLVTDPKGE LYRSMACWLK SKGYTVKGFN
LVQMGQSDHW NPLAEIRTPL DADVFAQVVI NTTETGPKKG GDAFWDRAEQ NLLKALALYV
TTELPADKRN FGSLYDILAA GDFEQVDALF AKLPPGHPAK GPYNVYAMAG DNVKGGVVIG
LGTRLQVFQQ EMVRRITGDS DIDLTLPGKG KCAYFIITPD THGAFDFLAS LLFTFLFVRL
VEVADTSPNG RLPVQVRFLL DEFANIVSIP EFEKKIATVR SRGLDCHVIV QSIPQLERKY
GRTWEEIMAC CDTKLIIGVK DDTTARYVSR MLGESTVETR SSTREVNPIW GQGLFDDKRS
LGITGRELMT PDEIQKMRSK FCLVFLPDGT PPAKLKVLDY EQFPEAKELK KVIVTEKKEE
EKELETEDEL NDGGNEDYHD TIDRQLVEDG EEKLMEENIK EGDRVIVTEN NTSNGKIIVP
W
|
|---|
| |