| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_8489 |
|---|
| Symbol | |
|---|
| ID | 7300734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011892 |
|---|
| Strand | - |
|---|
| Start bp | 219574 |
|---|
| End bp | 220614 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643597509 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_002495085 |
|---|
| Protein GI | 220919782 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.504362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCACAC TCACACGCAC ACGATCCGTC GCAGCCAGTC TCGTAGCGGT CACGGCCGTC
GCGTCAGGCC AGGCGCGCGC CGCCGACCTG ACCGTCACCG CCTTCGGCGG CGTCTGGGAG
AAGTCGCTGC GCACCTGCTA CATCGAACCG TTCCAGAAGC AGACGGGCAA GACGGTTGAC
GTCGTGCTCG GCACCGGTCC GCAATACGTC GCGCAGATCT CCGCCAACCC GCAGAAGCCG
CCGATCGACG TCCTGCTCCA CCTCATCGAC AGTGCCGAGG ATGCCAAGAA CAAGGGACTC
GTCGAGACGA TTGATCCGGC CAAGGTGCCG AACCTCGCCG ACGTCCCCGA GCCGTTCAAG
CGGATCGCGG GCGGGACCGC CGTCGCCACC CATTACGGGG CGGCGGGACT CGCCTACAAC
GCCGACAGGA TCAAGAACCC GCCCAAGACC TGGGCCGAGT TCATCGACCG CACCATCAAG
GGCGACTGGC AGGCGAGCCT GCCCGGGATC AACGTCGCCA GCACCACGCC GACGGCGGTG
ATCTGGAACT TCAACGACGT CCTGGGCGGC AAGGGGGCCG ACGTCGCGCC GGCGGTCGCG
AAGCTCAAGG CGATGCGCGA CAGCGGCAAT ATCGTCTTCT GGAACGACGT GAACCAGTTC
CTCACCCAGA TGCAGTCGGG CGAGGCGGAG ATCGGCATCT ACTGGGACGG CCGGGCCTGG
GCCGCGAAGG ATGGCGGCTT CAAGGCCCTC AACTTCGTCT ATCCCGAGCC GGGCGGCGTC
GTGAGTCCGA CGGTGGTGCA GAAGGTCAAG AACGGCTCTC CGCTCGCCTG GGACTTCATC
AACTTCCTGT TCGCGCCGGA CCGCCAGTCC TGCTGGGCCG CCGCCATCCA ATATCCCGTC
GTGAACACCA AGGCGGAATA CAAGCCGGAG CAGAAGGCCC GCATGCCGTC CTGGCAGAGC
GTGCGCTGGC CGCCCTTCGC CGAGATCCTC GCGAACAACG CGCAGTGGGT CGAGACCTGG
AACAAGCAGA TCGGACGCTG A
|
|---|
| Protein sequence | MPTLTRTRSV AASLVAVTAV ASGQARAADL TVTAFGGVWE KSLRTCYIEP FQKQTGKTVD
VVLGTGPQYV AQISANPQKP PIDVLLHLID SAEDAKNKGL VETIDPAKVP NLADVPEPFK
RIAGGTAVAT HYGAAGLAYN ADRIKNPPKT WAEFIDRTIK GDWQASLPGI NVASTTPTAV
IWNFNDVLGG KGADVAPAVA KLKAMRDSGN IVFWNDVNQF LTQMQSGEAE IGIYWDGRAW
AAKDGGFKAL NFVYPEPGGV VSPTVVQKVK NGSPLAWDFI NFLFAPDRQS CWAAAIQYPV
VNTKAEYKPE QKARMPSWQS VRWPPFAEIL ANNAQWVETW NKQIGR
|
|---|
| |