| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_7875 |
|---|
| Symbol | |
|---|
| ID | 7295515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011887 |
|---|
| Strand | - |
|---|
| Start bp | 106041 |
|---|
| End bp | 107492 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643592434 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_002490066 |
|---|
| Protein GI | 220914758 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.639992 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGC CCATCCGAAA CCATGCGGAC TCGCGCCTTG CCGTTCCTGC GAAGAGGCTC
TCTCTTATCG GCACCATCAC CTTGGCATTG GGTGGGTGCG TAACAGTCAC GCCCGACGGC
GGAATGCAAC CCGTCGCGCA AGAGGTCGCC GCGGCGATTT CGAAGGAGAC AGTCAAGATT
GCTTCGCAGG CAGACGCCGC AGATGCGCAA GCTCGGGCCA AGGCGCTTCT GAACAAGCCG
CTCACCGCCG GCACCGCAGT CCAGATCGCG CTCCTCAGCA ATCGCGGGCT GCAAGCGGAG
TATAATGCGC TCGGCCTATC GGAAGTCGAT TTCGTCGAAG CGAGCCTGCC GCCCAATCCG
ACGGTGACGC TCGGCCGCGC GGTGGTCGAT GGTACGCTTG ATGTCGAACG GCGCATCATC
GCCAATCTCC TGGCGCTGCT GACGCAGCCG ACGCGGCGGG CGATCGGCGA ATTGCGGTTC
GAGGCGGCGC GCTATCGCGC CATCGATGGG ACGTTCCGCA CGGCTGCCAA TGCCCGCAAG
GCCTATTATG CGGCCGTCGC GGCGCGGCAG AAGGTGAACT TTCTCGAACA GGCCCGTGCG
AGCGCCGATG CGGCCGCCGA TCTCACGCGC AGTCTCGGCG AAACGGGTGC AGCGAAGAAG
CTCGATCAAG CCCGTACGGC CGCTTTCTAT GCGGAGGTCT CCAATGAGCT TGCGGCGGCT
CGGCTCGAAG CAGGAACGAC GCGGGAAGCC TTGACACGCA GCCTCGGTGT GTGGGGCAGC
GACATCAACT ACAAACTCCC AAGCGAGTTG CCGCGCCTGC CGCAACGGCT GCTCTCCCAG
CAGACGGCGG AAGCCGATGC AATCCGCAAG CGTGTCGATC TCATAGCCTC GCGGCTCGAT
CTTGATGCGC TTGCCACGTC GCTGCGTCTC GACCAAGCAA CCCGCTACGC CTCGGCCTTC
GAGCTCGCGG GCTTGTCACG GTTCGAACGC AGCAAGGTCG ACGGTATCGT CGAGAAGACG
AGCTCGGCGG GTCATTCGCT CGATCTCGCT ATCGAGATCC CGATTTTCGA TCTCGGCGAG
ACGACGCGGC GGCGCGCCGT TGAAACCTAC ATGCAGGCGG TCAACCGCTT TGCCGAACAG
GCCGTGAATA TCCGCTCGGA GGCGCGTGCG GCTTATCTGA CCTATCGCGC CGCCTACGAC
ATCGCGCTCG CCTATCGCAA TAAGATCGTG CCACTGCGCC GGACGGTCAA CGAACAGTCT
CTGCTCGAAT ACAACGGCAT GCTCATCGAC ATCTTCGTGC TGCTGACGAC CTTCCGCGAA
GGCATCGACA GCAATATCGC GGCGATCGGC GCACAGCGCG ACTTCTTCAT CGCCCGTGTC
GATTTCGACG CGGCAATTCA GGGTGGCGGC TCAGGGCCCG GCGCGGCGAT CCGCGTTGCC
GCCGGCCAGT AA
|
|---|
| Protein sequence | MKPPIRNHAD SRLAVPAKRL SLIGTITLAL GGCVTVTPDG GMQPVAQEVA AAISKETVKI
ASQADAADAQ ARAKALLNKP LTAGTAVQIA LLSNRGLQAE YNALGLSEVD FVEASLPPNP
TVTLGRAVVD GTLDVERRII ANLLALLTQP TRRAIGELRF EAARYRAIDG TFRTAANARK
AYYAAVAARQ KVNFLEQARA SADAAADLTR SLGETGAAKK LDQARTAAFY AEVSNELAAA
RLEAGTTREA LTRSLGVWGS DINYKLPSEL PRLPQRLLSQ QTAEADAIRK RVDLIASRLD
LDALATSLRL DQATRYASAF ELAGLSRFER SKVDGIVEKT SSAGHSLDLA IEIPIFDLGE
TTRRRAVETY MQAVNRFAEQ AVNIRSEARA AYLTYRAAYD IALAYRNKIV PLRRTVNEQS
LLEYNGMLID IFVLLTTFRE GIDSNIAAIG AQRDFFIARV DFDAAIQGGG SGPGAAIRVA
AGQ
|
|---|
| |