Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_6497 |
Symbol | |
ID | 7307275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 6580806 |
End bp | 6583517 |
Gene Length | 2712 bp |
Protein Length | 903 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643604068 |
Product | valyl-tRNA synthetase |
Protein accession | YP_002501569 |
Protein GI | 220926267 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGGACA AGACCTTCGA TCCTGCCGCC GTCGAGGCGC GCATCGCCGC CGAGTGGGAG GAGGCGCAGG CCTTCCGGGC CGGGCGCCCC GACCGGGCGG ACGCCGCCCC CTACAGCATC ATGATCCCGC CACCGAACGT GACGGGCTCG CTGCATATGG GGCATGCCCT CAACAACACC CTGCAGGACG TGCTCGCCCG CTTCGAGCGC CTGCGCGGCA AGGACGTGCT CTGGCAGCCC GGCACGGACC ATGCCGGCAT CGCTACCCAG ATGGTGGTCG AGCGCCGCCT CGCCGAGCAC CAGGAGCCCG ACCGGCGCAC CCTCGGGCGC CCGGAATTCG TGCGCCGGGT CTGGGAATGG AAGGCGGAAT CCGGCGGCAC CATCGTCAAT CAGCTCAAGC GGCTCGGCGC CTCCTGCGAC TGGTCGCGCG AGCGCTTCAC CATGGACGAG GGCCTGTCCA GGGCCGTCAT CAAGGTCTTC GTCGACCTGC ACGCCGAGGG GCTGATCTAC CGCGACAAGC GCCTCGTGAA CTGGGACCCG AAGTTCCAGA CCGCGATCTC CGACCTCGAA GTGCAGCAGG TCGAGGTGAA GGGCCATCTC TGGCACTTCG CCTACCCGGT CGTGGACGAG GCCGGGCAGG AGACGGGCGA GACCATCACG GTGGCGACGA CCCGGCCCGA GACGATGCTC GGCGACACCG CGGTCGCGGT CCATCCGGAG GACGAGCGCT ACCGGGCGCT GGTCGGCAGG CGCGTGCGCC TGCCCCTCGT CGGGCGCCTG ATCCCGGTCG TCGCGGACGA GTACTCGGAT CCCGAGAAGG GCACCGGCGC GGTGAAGATC ACCCCGGCCC ACGACTTCAA CGACTTCGAG GTCGGGCGGC GCCACGACCT GCCGCTCGTC AATGTCTTGG ATGAAGAAGC CCGCATAAGC CTCGACGGCA ACGAGGCCTT CCTGAAGGAC GCTGCCCCCG AGCCGGAGAC CCTGGCGCTG CACGGGCTCG ACCGGGCGCA GGCGCGCAAG GCGGTGGTCG CCCTGATGGA GGCGCGCGGG CGCCTCGTGG CCATCGAGCC CAACACCCAT GCGGTGCCCC ATGGCGACCG TTCGGGCGAG GTCATCGAGC CCTACCTCAC CGACCAGTGG TACGTGAACG TCAAGCCGCT GGCGGAGCGC GCTATGCGGG CGGTGCGCGA CGGGAAGACC CGTTTCGTGC CGGAGGCTTA CGAGAAGACC TACTTCCAGT GGCTGGAGAA CATCGAGCCC TGGTGCATCT CGCGCCAGCT CTGGTGGGGC CACCAGATCC CGGCCTGGTA CGATGCCGAG GGCCAAGTCT TCGTGGCGGG GAGCGAGGAG GAGGCCCTGG CGAAGGCCGC CGCCCATCAC GGCCGCCCGG TGGCGTTGCG CCGCGACGAG GACGTCCTCG ACACGTGGTT CTCCTCGGGG CTCTGGCCCT TCTCGACGCT GGGCTGGCCC GAGGCGACGC CCGAGCTCGC CCGCTACTAC CCGACCAGCA CCCTGGTGAC GGGCTTCGAC ATCATTTTCT TCTGGGTTGC CAGGATGATG ATGCTGAGCC TTCACGCGAT GGACGAAGTG CCCTTCCGGA CCGTCTACAT CCATGCCCTC GTCCGCGACG AGAAGGGCGC CAAGATGTCG AAGTCCAAGG GCAACGTGGT CGATCCGCTC GATCTCGTCG ATCGCTACGG GGCGGATGCG CTGCGCTTCA CCTTGGCCGC CATGGCGGCG CAGGGACGCG ACATCAAGCT TTCCATCCAA CGCGTTGAAG GCTATCGGAA TTTCGCGACG AAGCTGTGGA ACGCCGCCCG CTTCGCCGAG ATGAATGGCT GCCGGATCGA TCCGGCCTTC CGGCCGGAGG CTTTGCGCGA GACGCTGAAC GCCTGGGCGC TCGGCGAGGC CGCCCGCGCG GTGGCCGAGG TGACGGCGGC GCTCGACGCC TTCCGCTTCA ACGACGCCGC GAACGCCGCC TACCGCTTCG TCTGGAACGT CTTCTGCGAC TGGTACCTCG AACTCGCCAA GCCGGTGCTC CAGGGCGAGG CGGGCACTGC GCAGGACGAG ACCCGCGCCA CGGTCGCCTT CCTGATCGAC CAGATCTGCA TCCTGCTGCA TCCCTTCATG CCCTTCCTGA CGGAAGAGCT GTGGGCGACG AAGGGCCAGG AGGCGGGGCT CGAGCGCGGG CTCCTGGCGC TCGCGCGCTG GCCGGATCTC GGCTCCTTGA GCCGGCCGGA GGCCGAGGCC GAGATCGGCT GGGTGGTCGA TCTCGTCTCC GAGATCCGCT CGGCCCGGTC CGAGACGAAC GTGCCGGCCG GCGCCCAGAT CCCGCTGGTG CTGGTGAACC CGAGCGAGGC CGTTCAGGCG CGCCTCGCCC GCTGGGGCGA GACCGTGCGG CGGCTCGGCC GCATCGCCGA GATCGGCACC GTGGCGCAGA GCCCCGCGAA GGCAATCCAG CTCCTCGTGC GCGGGGAGGT GGCGGCGCTG CCGCTCGAAG GCGTGGTGGA TCTCGCGGCC GAGGTGGCAC GCCTGCGCAA GGAGGAGGGC AAGCTCGACG GCGAGATCGC CAAGATCGAC GCCAAGCTCG CCAATGCCGA CTTCCTGGCC CGCGCGCCCG AGGAGGTGGT CGAGGAGCAG CGCGAGCGCC GCGAGGCGGC GGCCGAGCGG ATCGGCAAGG TGCGCGAGGC GCTGGTGCGG CTGGAGGGAT AG
|
Protein sequence | MMDKTFDPAA VEARIAAEWE EAQAFRAGRP DRADAAPYSI MIPPPNVTGS LHMGHALNNT LQDVLARFER LRGKDVLWQP GTDHAGIATQ MVVERRLAEH QEPDRRTLGR PEFVRRVWEW KAESGGTIVN QLKRLGASCD WSRERFTMDE GLSRAVIKVF VDLHAEGLIY RDKRLVNWDP KFQTAISDLE VQQVEVKGHL WHFAYPVVDE AGQETGETIT VATTRPETML GDTAVAVHPE DERYRALVGR RVRLPLVGRL IPVVADEYSD PEKGTGAVKI TPAHDFNDFE VGRRHDLPLV NVLDEEARIS LDGNEAFLKD AAPEPETLAL HGLDRAQARK AVVALMEARG RLVAIEPNTH AVPHGDRSGE VIEPYLTDQW YVNVKPLAER AMRAVRDGKT RFVPEAYEKT YFQWLENIEP WCISRQLWWG HQIPAWYDAE GQVFVAGSEE EALAKAAAHH GRPVALRRDE DVLDTWFSSG LWPFSTLGWP EATPELARYY PTSTLVTGFD IIFFWVARMM MLSLHAMDEV PFRTVYIHAL VRDEKGAKMS KSKGNVVDPL DLVDRYGADA LRFTLAAMAA QGRDIKLSIQ RVEGYRNFAT KLWNAARFAE MNGCRIDPAF RPEALRETLN AWALGEAARA VAEVTAALDA FRFNDAANAA YRFVWNVFCD WYLELAKPVL QGEAGTAQDE TRATVAFLID QICILLHPFM PFLTEELWAT KGQEAGLERG LLALARWPDL GSLSRPEAEA EIGWVVDLVS EIRSARSETN VPAGAQIPLV LVNPSEAVQA RLARWGETVR RLGRIAEIGT VAQSPAKAIQ LLVRGEVAAL PLEGVVDLAA EVARLRKEEG KLDGEIAKID AKLANADFLA RAPEEVVEEQ RERREAAAER IGKVREALVR LEG
|
| |