Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_4949 |
Symbol | |
ID | 7307509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 5034223 |
End bp | 5035323 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643602589 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002500109 |
Protein GI | 220924807 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.597771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACGAT CCCTCCTCCG CCGCAGCCTG ATCGCCGCGG CCTGCCTCGC CGTCGTCTGG CCCGCCGCAG CGGAGGAGCG GGTCGTCAAC GTCTACAACT GGTCGGATTA TATCGACCCC AAGATGCTCG ACGCCTTCAC CCGCGAGACG GGCATCAAGG TCGTGTACGA TACCTACGAC ACGAACGAGA TCGTCGAGAC CAAGCTTTTG GCCGGCAAGT CGGGCTACGA CATCGTGGTG CCGTCCGGGC CGTTCCTGCA GCGCCTCATC AAGGCGGGCG TGTTCCAGCC CCTCGACAAG AGCAAGCTGC CGAACCTGAA GAACCTGTGG CCCGAGATCG CCGCGCGGCT CGCCGCCTAC GATCCGGGCA ACACCTTCGC CGTCAACTAC ATGTGGGGCA CGACGGGCAT CGGGGTGAAC ACCGCGCTGG TGCGCGAGCG ACTGGGCCCC AACCAGCCGC TCAACACCTG GGACATCGTC CTGCGGCCCG AACTCATCGT CAAGCTCAAG GATTGCGGCG TCACCATGCT CGACGCCCCC GAGGACCTGT TCCCGAACGT GCTCGCGGCG CTCGGCCTCA AGCCCGATTC GAAGCGGATC GACGACCTGA ACCAGGCCGG GGAGGCGCTG ATGCGCGTCC GCGGCGCGGT GCAGAAGTTC CATTCCTCCG AGTACATCAA CCAGCTCGCC AACGGCGACG TCTGTCTCTC GGTGGGCTAT TCGGGCGACG TGCTGCAGGC CCGCAAGCGG GCGCAGGAGG CCAAGAACGA CGTCGACATC GCCTACTACA TCCCGCAGCA GGGTGCGCTG ATGTGGTTCG ACTCCTTCGC GATCCCGAAG GATGCGCCGC ATCCGGCGGA GGCCCACGCC TTCATCGACT TCATGCTGCG CCCCGAAGTG GCGGCGGCCA ACACCAACTT CGTATCCTAT GCGAGCGGCA ATCTCGCGGC GAAGTCGCTG GTCAAGCCCG AGATCCTGTC CAATCCCGGC ATCTACCCGG ACGAGGCGAC GTTCAAGCGG CTCTTCACCA ACACCGCCTA CGACGACCGC ACGCAGCGCG TGGTCACCCG GCTGTGGACC CGGATCCGCA CCGGAAAGTG A
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Protein sequence | MGRSLLRRSL IAAACLAVVW PAAAEERVVN VYNWSDYIDP KMLDAFTRET GIKVVYDTYD TNEIVETKLL AGKSGYDIVV PSGPFLQRLI KAGVFQPLDK SKLPNLKNLW PEIAARLAAY DPGNTFAVNY MWGTTGIGVN TALVRERLGP NQPLNTWDIV LRPELIVKLK DCGVTMLDAP EDLFPNVLAA LGLKPDSKRI DDLNQAGEAL MRVRGAVQKF HSSEYINQLA NGDVCLSVGY SGDVLQARKR AQEAKNDVDI AYYIPQQGAL MWFDSFAIPK DAPHPAEAHA FIDFMLRPEV AAANTNFVSY ASGNLAAKSL VKPEILSNPG IYPDEATFKR LFTNTAYDDR TQRVVTRLWT RIRTGK
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