| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_3177 |
|---|
| Symbol | |
|---|
| ID | 7305399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 3283182 |
|---|
| End bp | 3285362 |
|---|
| Gene Length | 2181 bp |
|---|
| Protein Length | 726 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643600864 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002498409 |
|---|
| Protein GI | 220923107 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGC TTGGACCGGA GATGGGGCTA CCGCCCATCA AGACGCGGGG GGGCCCGGAT
CTGAATGTCC GGGATACGGG CGCCACCCTC TTGTTCGTGG TGTTCAAGTG GCTGCCGCAG
ATGGCCGCCG TCGTCGGGAT CGGGATCCTG TGTGGGCTCG GCTACCTGAC TCTGGTGCGC
GGGAATCTGT TCCAGGCTAA CGCGAAGCTC TACGTTCGCG TCGGCGTGGA TCAGACACCC
TCGCCGCTGC TCGGCTCGGA CCGCAACGTC ACGTTCCTGG CGCAAACCCG CGGCGCCGTG
CAGTCGGAGA TGGATCTCCT GCGCAACGAG GTGCTGGTCT CGCGTCTGAT CGCGGACCTG
AACCTCGGCG CGCCGGAGGC GCGGCCGGAG CCGACGGGTC TGTACGGTCG CCTGAAGCGG
CTCGGCTCCG ACGTCTACCA GGCGGCGCGG GACGGCGCTG ATGCGATCCT GATCATGGTT
GGCTTGAAGA CGCCGCTGTC GCGCTCAGCC GCGGTCAGCC AAGTCTTCGC CCAGTCGCTG
ATTCTCGACA ATGCGCCGGG TTCCGATGTC ATCTCGGTGA GCCTGCGCTG GCCCAACGAG
GCGCAGGCCG TGCTGCTCCT CGACCGGTTC CTACAGATCT ACACCAATTT TCGCTCGGCC
GTGTTCGAGG GGGGCGGCGA GATCGACTTC CTCAGCACCA AGCGTGACGC CGCGAAGGCA
GACCTGGAGG CGGTCGATGC GGAGATGGCT GTCTACGAGC GCGAGCATGA CATTCGCAAT
ACGGCAAGCC GTGCGCCCCT GCTCGAGGCC GACCTCGTGG ACGCGCAGCG CTCGCTCGAG
CGCCAGACTC TCGAACTCGA CTTTGCGCGC CGGCGCTTCG AGCGGCTCGG CCGAGTCCTG
GGCCGCGGCG CGGCAAACCA GCAGCGCGAG CCGGTGGGTC TCGGGACCTT CCCGCCGAAC
TCGCCGGCCC TCAGCATGGC GCCATCGATG GTGACGCTGC TCGGCGAGCG CGAGCGTCTT
CTCGTCAACA ACACGGCCAA TGCACCCGAG GTGAGGGAGG TCGAGGCCAA GCTCGGAGCG
CTGACCGTCG TTCTGCTCCG GCAGCTCGAG GCAGAGGTTC AGGATCTCGT CCACGTTGAG
GCGACGGCGC GGGAGCGGGT GGACAAGGTC GCGACGGCGT TGCGCGAATT TCAGGATTCG
GCGGCCGGTT GGAAGTCGCT GGAACGGCGT CGCGAGCTCG CCGAGGCGCG CTACCGCGAT
GCCGAGAAAC GTCTCGGCGA AGCGCGCGAC ATCGCCGCCC TCAGGAACGC GCGGCTCTCC
AACGTGGTCG TCGTGCAGCC CGCCGCCGCC GAGGGCGTTC CAATCGGACT TCGCAAACTC
CCGATGCTCG GCATCATCGC GCTGTGTTCG GGGGTGCTCG CCAGTGGCTG GGCCCTCGTC
CGCGAGATCT TCGACGGACG CCTCTACCGG GGCGAAGCGG CCGCCGCCGA GCTCGGCCTG
CCGCTCGCCG GCGAGGTGCC CGAGCGGGAT GGCCTGCTGC AGGTGTGGTC ACGGGGCGAC
CGCGCCGCCC CGGAGGCGCG GGTCGCCCTC GACCGGCTCG TTGTCACGGT CACCGAACGC
CTGCGCGGCG ACCGGACCGC CGTCCTGGCG ATTGCCGCCG CCGAGGCGGA TGAGGGCACC
TCCACCATCG CCCTCGCGCT CGCCTACGGC ATGGCCCGGC GCGGCCGTCA GGCGGTGCGC
CTCATCGCAG GATCGACGAG CCAGGCCCTG CTGGAACACG CCCGGGACCT CGGCGTAAGC
CTGCACCCGC TGCCGGGTTC GCCGGATCTG CCCCCCGGCC TCGTCCTGAC CGCCGTCGGC
GACCATCTGG TCGTGGGAAC CTGGGCAGAG CCTGAAGCAG CCGCGACCTT CCTGCGGGAG
GGCGACGCAA CCTGTCCAAG CCTGCGAGGA GACGCCCGCA TCATCCTCAT CGACCTGCCG
CCCCTGTCGG GTGAGGCGGA GGCGCCGCTC TGCGCGAGCC GGGCGGATGC AACCCTCCTC
GTTGTTCGCG CCGGCTGGCA CGCCGCCGCG CGGCACATCG CGGCTCTCGA GTCCCTGAAG
TGGCTCGGCG CGGAGCCGAT TGGCTTCGTT CTCAACCGCG TGCGCGGCTT CGTTCCCGCT
CGCCTGGAGC GGGCCCGATG A
|
|---|
| Protein sequence | MNKLGPEMGL PPIKTRGGPD LNVRDTGATL LFVVFKWLPQ MAAVVGIGIL CGLGYLTLVR
GNLFQANAKL YVRVGVDQTP SPLLGSDRNV TFLAQTRGAV QSEMDLLRNE VLVSRLIADL
NLGAPEARPE PTGLYGRLKR LGSDVYQAAR DGADAILIMV GLKTPLSRSA AVSQVFAQSL
ILDNAPGSDV ISVSLRWPNE AQAVLLLDRF LQIYTNFRSA VFEGGGEIDF LSTKRDAAKA
DLEAVDAEMA VYEREHDIRN TASRAPLLEA DLVDAQRSLE RQTLELDFAR RRFERLGRVL
GRGAANQQRE PVGLGTFPPN SPALSMAPSM VTLLGERERL LVNNTANAPE VREVEAKLGA
LTVVLLRQLE AEVQDLVHVE ATARERVDKV ATALREFQDS AAGWKSLERR RELAEARYRD
AEKRLGEARD IAALRNARLS NVVVVQPAAA EGVPIGLRKL PMLGIIALCS GVLASGWALV
REIFDGRLYR GEAAAAELGL PLAGEVPERD GLLQVWSRGD RAAPEARVAL DRLVVTVTER
LRGDRTAVLA IAAAEADEGT STIALALAYG MARRGRQAVR LIAGSTSQAL LEHARDLGVS
LHPLPGSPDL PPGLVLTAVG DHLVVGTWAE PEAAATFLRE GDATCPSLRG DARIILIDLP
PLSGEAEAPL CASRADATLL VVRAGWHAAA RHIAALESLK WLGAEPIGFV LNRVRGFVPA
RLERAR
|
|---|
| |