Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_2910 |
Symbol | |
ID | 7304082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 3002651 |
End bp | 3003319 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643600618 |
Product | haloacid dehalogenase, type II |
Protein accession | YP_002498164 |
Protein GI | 220922862 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGCGT TTCGGCCCAA ATACATCACC TTCGATTGCT ACGGCACGTT GACGAACTTC CAGATGGCCG AGGCGGCGCG GAGCATCTAC GGCGTCACGC TCGAGGCCCC CCGCATGACG GAGTTCATCA GGAACTTTGC GGCCTACCGG CTCGACGAGA TCCTCGGCGA CTGGAAGCCG TACGACGAGG TGATCCACAA CGCCGTGGAG CGCACCTGCC GCAAGACCGG TGTCACCTTC CGCCCGGAGG ACGCGCGCGC CATCTACGAG CGGGTGCCGA CCTGGGGGCC GCATCCGGAC GTGCCCGCGG GCCTCGCCAA GGTCGCCCGG GAGATCCCGC TGGTGATCCT GTCCAACGCC ATGGACGCGC AGATTCCCTC CAACGTCGCC AAGCTCGGCG CGCCCTTCCA CGCGGTCTAC ACGGCGCAGC AGGCCGGGGC CTACAAGCCG CGCTTGCGCG CCTTCGAGTA CATGTTCGAT AGGCTCGGCT GCGGACCGGA GGACGTGATG CACTGCTCGT CCTCCTTCCG CTACGACCTG ATGTCCGCCC ACGATCTCGG CATCCGGCAC AAGGTCTGGG TGAATCGCGG GCACGAGCCG GCAAACCCCT ATTACGGCTA TGTCGAGATC AGGGACATCT CCGGCCTGCC CGGCATCGTC GGGCTCTAA
|
Protein sequence | MSAFRPKYIT FDCYGTLTNF QMAEAARSIY GVTLEAPRMT EFIRNFAAYR LDEILGDWKP YDEVIHNAVE RTCRKTGVTF RPEDARAIYE RVPTWGPHPD VPAGLAKVAR EIPLVILSNA MDAQIPSNVA KLGAPFHAVY TAQQAGAYKP RLRAFEYMFD RLGCGPEDVM HCSSSFRYDL MSAHDLGIRH KVWVNRGHEP ANPYYGYVEI RDISGLPGIV GL
|
| |