Gene Mnod_2543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_2543 
Symbol 
ID7303332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp2616824 
End bp2617573 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content68% 
IMG OID643600265 
ProductLytic transglycosylase catalytic 
Protein accessionYP_002497812 
Protein GI220922510 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACAT CACGATTCGG AGGAGGAGCG GCGCTCGCTC TGACGCTGCT GGTGTGCGCG 
TCGGTTCCGG CGTCTGCCAT GCAGGGCAGA ACCGCGACGA CCGAGACGAA ACCAGCACCG
ATCGGGGCAG ACGATGCTCT GTCGCGACAA TTCCCGCGCC GGTCGCGGTA CCTGCCGATC
CTGATGCGGG AGGCGCTCGC GCGGGGGCTG CCGCCCCAGA TCGCCGATGC GGTCGTACGC
ATCGAGAGCG GGTACGATCC GAGTCAAATC GGGTCCGTGG GGGAAATCGG GTTGATGCAG
GTGCGGCCGG CCACCGCCGC TATGCTGGGG TTTCGCGGGA CCGACGCGGA CCTCGCGGTC
CCCGAGACGA ACCTCCACTA CGGCGTGGCC TACCTGGCCG AAGCCTGGCG CTTGGCGGGC
GGAGATCTCT GCCGCACGCT GATGAAGTAC CGCGCGGGGC ACGGCGAGAA GACAATGAGC
CCGCTCAGCG TCGAATACTG CCAGCGCGCG CGCACGCATC TTGCCAGCCT CGGATGGTCC
CCCGAGCCAG GCTCAAGCGC GCCGGCTGCG CCGACGCCCT CCCCGGCTCC GAAGGTGCAG
CCCACGCGAA CAGCCGTTGT GCCTCGGAAC TCTTCCGCAT CGGGGGGGCC AAAGATCGTG
TCTGTGAAAG ACGCGCCTGC ATTCTGGGCT GCAAACCGCA TGCGCGTGGC AGAGGCGTGG
ACACGGATTT CCGTGATGCA CAGGCGTTAG
 
Protein sequence
MRTSRFGGGA ALALTLLVCA SVPASAMQGR TATTETKPAP IGADDALSRQ FPRRSRYLPI 
LMREALARGL PPQIADAVVR IESGYDPSQI GSVGEIGLMQ VRPATAAMLG FRGTDADLAV
PETNLHYGVA YLAEAWRLAG GDLCRTLMKY RAGHGEKTMS PLSVEYCQRA RTHLASLGWS
PEPGSSAPAA PTPSPAPKVQ PTRTAVVPRN SSASGGPKIV SVKDAPAFWA ANRMRVAEAW
TRISVMHRR