| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_2189 |
|---|
| Symbol | |
|---|
| ID | 7302484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 2299992 |
|---|
| End bp | 2300942 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643599926 |
|---|
| Product | protein-export membrane protein SecF |
|---|
| Protein accession | YP_002497474 |
|---|
| Protein GI | 220922173 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0341] Preprotein translocase subunit SecF |
|---|
| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.279609 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTCC TCCGCCTCTG GCCCGACGAA TCCCATTTCG ACTTCATGCG CTTCCGGCGC
TTCAGCTTCC CGTTCTCGGC GCTGATGTCG GTGGGCACGC TGGTGCTGTT CCTGATGATC
GGCCTGAACT TCGGCATCGA CTTCAAGGGC GGCACCCTGA TCGAGCTGCG GCCGAAGTCC
GGGCAGTCCG ATGTCGCCGC CGTGCGCCAC ACCGCCAACG GCTTCGGCTT CGGCGAGACC
GAGGTGCAGG AATTCGGCAA CCAGGGCTCG ATCTCGATCC GCTTCCCCCT CCAGGCCGGC
GGCGAGACCG GCCAGACCCT GGTGATGCAG AAGGCGCACG CGGCCTTCGA CAAGGACTAC
GTCTTCGACC GCGTCGAGAC CGTCGGCCCG CGCGTCTCGG GCGAGCTCGT CCAGTCCGGC
ACGATCGGCG TCGTGCTCTC GGTGGTGGCG GTGCTGCTCT ATCTCTGGTT CCGGTTCGAG
CGGGAACTTG CCCTCGGCGC CATTGTCGGC ACGCTGCACG ACATCGTGCT CACGGTCGGC
GTCTTCGTCA TCTCGCGTAT CGAGTTCAAC ATGACCTCGA TTGCCGCCAT CCTCACCATC
GTCGGCTATT CGCTGAACGA GACAGTGGTG GTGTTCGATC GCACGCGCGA GCTGATGCGG
CGCTACAAGA CCATGCCGAC CGAGCAGCTC CTCAACCTCT CGATCAACAC CACCATGTCG
CGCACGGTGA TGACCGCCAC CTCGACCGCG CTGTCGCTCA TGGCCCTGGT CCTGTTCGGC
GGCGAGGCGA TCAAGGGCTT CTCGGTGGTG ATGCTGATCG GCGTGCTGAT CTGTACCTAC
TCGGCGATCT TCGTCTCCTC GCCCTTCCTG ATCTATATCG GCCTGCAGGC GGGAGGCGGT
CTGCGGGCGA CGGGCCGTGA ATCGACCGCG CTGCCCCAGG CGGCCGAATG A
|
|---|
| Protein sequence | MRLLRLWPDE SHFDFMRFRR FSFPFSALMS VGTLVLFLMI GLNFGIDFKG GTLIELRPKS
GQSDVAAVRH TANGFGFGET EVQEFGNQGS ISIRFPLQAG GETGQTLVMQ KAHAAFDKDY
VFDRVETVGP RVSGELVQSG TIGVVLSVVA VLLYLWFRFE RELALGAIVG TLHDIVLTVG
VFVISRIEFN MTSIAAILTI VGYSLNETVV VFDRTRELMR RYKTMPTEQL LNLSINTTMS
RTVMTATSTA LSLMALVLFG GEAIKGFSVV MLIGVLICTY SAIFVSSPFL IYIGLQAGGG
LRATGRESTA LPQAAE
|
|---|
| |