Gene Mnod_2102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_2102 
Symbol 
ID7305042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp2204620 
End bp2205339 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content67% 
IMG OID643599841 
ProductLytic transglycosylase catalytic 
Protein accessionYP_002497390 
Protein GI220922089 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.67123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAGAC ATGCTCTCCT CCAGGCAGGC CTGGCAATAT CATTCTTGCT GGCCCCGGCG 
GGTCTGCTCC CGGATGATCG CGGAGGTGGC TCATCGGATG CCGCTGTTGT CTCGCATCCG
CCCGCTCTTG CGGTCGTCGT CCCGCGCATC GTGGTGGACA CCCTGCCGGG TGGCCCGGCC
CACCTGTATG CGAGCCGGGC TCTGGCGAAC ACCGACGCGG CACCGGGCGC GCAACTGATT
CTCCTGACCG TTGAGGATGC GTGGTCGGCA GCCTTCTTCG GCGACAAGCA GCGCATGACG
GAGTTCATCG AGCGCTCGGC GGTGGCCAAC GGCCTCCCGG CCGAGTTCCT GCTGCGGCTG
CTGAAGCAGG AGAGCGGCTT GAACCATCAG GCGGTCAGCC GCGCAGGGGC ACAGGGCATC
GCTCAATTCA TGCCGGCAAC CGCCGGCGAG CGCGGGCTGC TCGATCCCTT CGACCCGTTC
GAGGCGATCC CGAAATCGGC GGAACTCCTG CGCGAGTACC GGACCCGCTT CGGCAGCCTC
GGCCTGGCCG CAGCGGCCTA CAATGCGGGT CCGCGACGGG TGAGAGACTG GCTTGAGGGT
CGCTCGGTTC TGCCGAAGGA GACACGCGAT TACGTGACGA AGATCACGGG GCGGACGGCA
GACGAATGGC GCGTCAACGG GGATGGTTTC GCCTTCGCGG GCTGGGGCAA CGCTCCATGA
 
Protein sequence
MSRHALLQAG LAISFLLAPA GLLPDDRGGG SSDAAVVSHP PALAVVVPRI VVDTLPGGPA 
HLYASRALAN TDAAPGAQLI LLTVEDAWSA AFFGDKQRMT EFIERSAVAN GLPAEFLLRL
LKQESGLNHQ AVSRAGAQGI AQFMPATAGE RGLLDPFDPF EAIPKSAELL REYRTRFGSL
GLAAAAYNAG PRRVRDWLEG RSVLPKETRD YVTKITGRTA DEWRVNGDGF AFAGWGNAP