| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1830 |
|---|
| Symbol | mdoD |
|---|
| ID | 7305860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 1930058 |
|---|
| End bp | 1931617 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643599565 |
|---|
| Product | glucan biosynthesis protein D |
|---|
| Protein accession | YP_002497123 |
|---|
| Protein GI | 220921822 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.191017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAACC GCCGCACGTT CCTCTCCGGA GCCGCGCTTC TCGTCGGCTC CGGCCTCCCC
GCCGCAGCCT CCGGCCTGCC GCTCGGCGCC CCGGCCCCGT TCAGCTTCGA GAGCCTGAAG
GACCGGGCCC GCGCCCTCGC CGCCGCCCCC TATGCGGCGC CCGCGATCCC CGACCGCGAG
GTGCTCCAGG CGATCGACTA CGATGCCCAC GGCAAGCTCC GGTTCAAGCC GGACCACGCC
CTGTGGGCGG ACGGCCCGAG CGCCTTCCCG GTGACCTTCT TCCATCTCGG CCGCTACTTC
CAGAAGCCGG TGCGGATGCA CGCGGTCGAG GGCGGGCAGG CCCGTGAGAT CATCTACGAC
CCGAACGCCT TCGAGATGCC GGCGGATTCG CCCGCCCGGC GCCTGCCGCC GAATCCGGGC
TTTGCGGGCT TCCGCTTCCA GGAGCGGCGC GGCGGCGCCC TCGACTGGCG GCGGAACGAC
TGGGTCGCCT TCCTCGGCGC CTCCTACTTC CGGGCCATCG GCGAACTCTA CCAGTACGGC
CTGTCCGCGC GGGGGCTGGC CCTCGACACG GTGATGCCGG ACCGGCCCGA GGAATTCCCG
GACTTCACTC ATGTCTGGTT CGAGACGCCG GCACCGGATT CCGACACCGT GACGGTGATG
GCGCTCCTCG ACGGCCCGTC AGTCGCGGGC GCCTACCGGT TCCGCATGCG GCGTACCAAG
TCGGTGGTGA TGGAGATCGA GGCGCAGTTG CATCTGCGCC GGGATGTGGG GCGTTTCGGC
CTCGCTCCCC TCACCTCCAT GTACTGGTTC TCGGAGACGG CCAAGCCCAA CGCCGTCGAC
TGGCGGCCGG AGGTGCACGA TTCGGACGGG CTCGCCCTCT GGACCGGCAC CGGCGAGCGC
ATCTGGCGGC CGCTGCGCAA CCCGCCCCGC ACCATGGTCT CGGCCTTCTC GGACGAGCGC
CCCCGCGGCT TCGGCCTGAT GCAGCGCGAC CGCGTCTTCG ACCACTACCA GGACGGGGTC
TATTACGACC GCCGGCCCTC GCTCTGGGTC GAGCCGCTGG GCGATTGGGG TCGCGGCAGC
GTGCAGCTCG TCGAGAATCC GACCGACGAC GAGATCCACG ACAACGTCGT GGCGATGTGG
GTGCCGGCCG AGCCGGCCCG CGCCGGCAGC GTGCACGACC TCGCCTATCG GCTGCATTGG
GTAGCGGACG AGCCCTACCC CTCGGCCTTC GCGCGCTGCG TGGCGACCCG CGAGGGCAAT
GGAGGACAAG CGGGGACGGA GCGCCCGAAG GGCGTGCGCA AGTTCGTGGT GGAGTTCCTC
GGCGAGCCGC TGGCGCGCCT TCCCGCGGGG GTGAAGCCCG AGCCCGTCCT CACCGCCTCG
CGCGGCGCCT TCCCGCTCGC CCGCACCGAG GCGGTGCCCG ACGACGTGCC GGGCCATTGG
CGCACCGAGT TCGACCTCGC GGTGACGGGG CCCGAGCCGG TGGAGCTGCG CCTGTTCCTG
CGCCGGGGCA CCGAGACCCT GAGCGAGACC TGGACCTACC AGTACATCCC GCCAGGCTAG
|
|---|
| Protein sequence | MLNRRTFLSG AALLVGSGLP AAASGLPLGA PAPFSFESLK DRARALAAAP YAAPAIPDRE
VLQAIDYDAH GKLRFKPDHA LWADGPSAFP VTFFHLGRYF QKPVRMHAVE GGQAREIIYD
PNAFEMPADS PARRLPPNPG FAGFRFQERR GGALDWRRND WVAFLGASYF RAIGELYQYG
LSARGLALDT VMPDRPEEFP DFTHVWFETP APDSDTVTVM ALLDGPSVAG AYRFRMRRTK
SVVMEIEAQL HLRRDVGRFG LAPLTSMYWF SETAKPNAVD WRPEVHDSDG LALWTGTGER
IWRPLRNPPR TMVSAFSDER PRGFGLMQRD RVFDHYQDGV YYDRRPSLWV EPLGDWGRGS
VQLVENPTDD EIHDNVVAMW VPAEPARAGS VHDLAYRLHW VADEPYPSAF ARCVATREGN
GGQAGTERPK GVRKFVVEFL GEPLARLPAG VKPEPVLTAS RGAFPLARTE AVPDDVPGHW
RTEFDLAVTG PEPVELRLFL RRGTETLSET WTYQYIPPG
|
|---|
| |