Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_1732 |
Symbol | |
ID | 7306349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 1823033 |
End bp | 1823989 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643599467 |
Product | porphobilinogen deaminase |
Protein accession | YP_002497025 |
Protein GI | 220921724 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0335479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTCTCC GACGGCAAGA CATGGTCCAC CGCCCCCTGC GCATCGGCAC CCGCGGCAGC CCGATGGCGC TCGCCCAGAC CGGCATGGTC CGCGACCGCA TCGCCGCCGC GCATCCTCAC CTCGCCGAAC CCGGCGCGAT GGAACTCGTC GTGGTCAACA CGGTGGCGGA CAAGGTCCTC GACCGGCCGC TCTCGGCCAT CGGCGGCAAG GGGCTGTTCA CCAAGGAACT CGAACAGGCG CTGTTCGCCG GCGAGATCGA CCTCGCCGTC CACTCGATGA AGGACGTCGA GACCTGGCTG CCGGACGGGC TCGTCATCGC CAGCATCCTT GAGCGGGACG ACCCGCGCGA TGCCTTCCTG TCGCTCAAGG CGCGGAGCCT CGCCGAGCTG CCGGCCGGCA GCCGCGTCGG CACCTCGTCC CTGCGGCGGG GCGCGCAGGT GCTGATGCGC CGGCCGGACC TGCAGATCGT GCCGCTGCGC GGCAACGCCA ACACCCGCAT CCGCAGGCTG GAGGAGGGGG CCTGCGATGC GACGCTGCTC GCCATTGCGG GGCTGGAGCG GCTCGGCCTC GCCCATCTGG CGCAGGAGGT GATGGGCACC GACACGATGC TGCCCGCGGT GGCGCAGGGC GCGCTCGGCA TCGAGTGCCG CGCGGCCGAT CAGGAGCTCA TCGACCTCCT CCAGGCGGTG GCCTGTCCCC GCACCACCAC GGCGCTCGCC GCCGAGCGCG GGCTCCTCGC CGAGCTCGAC GGTTCCTGCC GCACGCCGAT CGCGGCGCTG GCCGAGATCG AGGGCGACCG GCTCACCCTT AACGGCCTTC TGTTCCTGCC CGATGGCAGC GCGCATTGGG CGACGACGCG CAGCGGCCCG GCCGCCGAGG CCGCCGCCAT CGGCAAGGAG GCCGGGGCGG ACCTGAAGGC GCAGGCGGGC GAGACCTATC GCAAGCACCT GCAATAG
|
Protein sequence | MVLRRQDMVH RPLRIGTRGS PMALAQTGMV RDRIAAAHPH LAEPGAMELV VVNTVADKVL DRPLSAIGGK GLFTKELEQA LFAGEIDLAV HSMKDVETWL PDGLVIASIL ERDDPRDAFL SLKARSLAEL PAGSRVGTSS LRRGAQVLMR RPDLQIVPLR GNANTRIRRL EEGACDATLL AIAGLERLGL AHLAQEVMGT DTMLPAVAQG ALGIECRAAD QELIDLLQAV ACPRTTTALA AERGLLAELD GSCRTPIAAL AEIEGDRLTL NGLLFLPDGS AHWATTRSGP AAEAAAIGKE AGADLKAQAG ETYRKHLQ
|
| |