Gene Mnod_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_0542 
Symbol 
ID7306037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp609625 
End bp611337 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content44% 
IMG OID643598317 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_002495883 
Protein GI220920582 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2131] Deoxycytidylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCTT CAATGGCGCT AGGTGTGGCA CCCTGGGGCT TGTCGGCAGG TCGCATCGCT 
GATCCTCTTA CCGTCACGGT GCTACCAAAC TGTAAACGGT TGGTGAAGAG CATGGTTGCT
ACAGTCCCCG AGATAAAATT CCCGGAAATC ATTATCGGTA TTGTGGCGCC AATAGGCGCT
GAAGTGAATG CCTGTGTTCG CGAGTTCGTT AAATATTTCA AGAAAGCAGA GTATGAGGTT
GTAGAAATCA AGGTTACTGA TGTTTTTAGA AAGCTAAAAA ATTACATTGA GCCGACCACA
AATTTAGAAG AGGCCCCGTT ATTTGTGAGG TATGACATAT ATACTTCGTA CGGAAATCAG
CTTCGTTCTG AATTTTCTGA TGATATTCTA GCTGCTACCT CGCTTGGTAG AATTGTCAAA
TCGCGCCCTA ATCTTCCGCG TCAACATGGG CAGCGTGCGT TTGAGCGCGT CGTTTACATT
GTTCATCAGT TCAAGAGGAA GGAGGAAATT GACCTTTTCC GTGCAGTTTA CGGCAGGTTG
TTCTTTCAAG TTTCAGTTTA TTCGCGTCGC GGGGCTAGAG TCGACTATCT GGCGCAGAGG
TTTGCAAATA GCGATAATTC TGCAAATCCA AATATGTACC GCTATCATGC TGAAAACTTA
GTTCAGCGCG ATGAAAACGA AAAAGATGAA CATGGTCAGA AGGTCTCTAA GGTGTTTCAT
GATGCAGATT TCATAATCAA CAGCGATATT CGTAGCCCCT CGATTGAAAA TCAAATAATA
AGATTTTGTG ATCTTCTTTT TGGATCGAAT AGCATATCGC CAACAAAAGT AGAATATGGA
ATGTTCATAG CGAAGGCGGC CGCATTGCGG ACCTTGGATC TCTCAAGACA AGTGGGTGCG
GCGATTTTTA CCAATAACGG CGAGATAGTT TCGATGGGCT CTAACGAGGT CCCCAAAGGA
CAAGGAGGGA CTTATTGGGG CGATGATGGT CTTGACGATC GTGAGTATGT TCGCGAACAC
GACTCGAACG ATAGAAGAAA GTTAGAAATA CTTTCGGAAA TAACAGGAAT ATTGAACTTA
AAAATTGAAG ATGTTATGAA GATAAAGGGA ATTAGAGACT CTCAATTTAT GGATGCTTTG
GAGTATGGCA GAATTGTTCA TGCGGAAATA CTTGCAATCT CAGATGCCGC TAGACTTGGG
AGATCTACTC ACGACACGGT ACTTTACTGT ACTACGTTTC CTTGCCATAT GTGCGCAAAA
CACATTGTGG CATCAGGGGT CAAAAAAGTA GTCTTTCTAG AGCCTTATCC TAAAAGCTTG
GTGGCCGATC TTCATAGCGA CTCAATTTCC ATCGAAAATA GCGATCGCGG CCGGTATGAA
GATTTTCAGG CAGTTGATTT CGAGCACTTC CATGGAATTA CGCCGCGCAG GTATCGTGAG
CTTTTTGAGC GTGGCAAGAG AAAGGATGAT AATGGCAAAT TCAGACAGTG GAACAAGGGA
AATCTACCAT CACCTCAACC AAATTTGGGC GTGAACGTAC CCTTCTATCA GCAGATTGAA
AAGCTAATTT TTGAAGATTA TCTTGGAGGG CAACTCAAGA ACAAGGGTAT AGATCCTTCT
GTTCTGGATC CTGAGACATC GGGAGGGGAA TCTGCTAGCA CTTCTTCTAC GGATGCGCCA
CAGGATGTCT CTGGTAAGTT TTTGCAGCTT TGA
 
Protein sequence
MAASMALGVA PWGLSAGRIA DPLTVTVLPN CKRLVKSMVA TVPEIKFPEI IIGIVAPIGA 
EVNACVREFV KYFKKAEYEV VEIKVTDVFR KLKNYIEPTT NLEEAPLFVR YDIYTSYGNQ
LRSEFSDDIL AATSLGRIVK SRPNLPRQHG QRAFERVVYI VHQFKRKEEI DLFRAVYGRL
FFQVSVYSRR GARVDYLAQR FANSDNSANP NMYRYHAENL VQRDENEKDE HGQKVSKVFH
DADFIINSDI RSPSIENQII RFCDLLFGSN SISPTKVEYG MFIAKAAALR TLDLSRQVGA
AIFTNNGEIV SMGSNEVPKG QGGTYWGDDG LDDREYVREH DSNDRRKLEI LSEITGILNL
KIEDVMKIKG IRDSQFMDAL EYGRIVHAEI LAISDAARLG RSTHDTVLYC TTFPCHMCAK
HIVASGVKKV VFLEPYPKSL VADLHSDSIS IENSDRGRYE DFQAVDFEHF HGITPRRYRE
LFERGKRKDD NGKFRQWNKG NLPSPQPNLG VNVPFYQQIE KLIFEDYLGG QLKNKGIDPS
VLDPETSGGE SASTSSTDAP QDVSGKFLQL