Gene Mnod_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_0533 
Symbol 
ID7306028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp600864 
End bp602009 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content69% 
IMG OID643598310 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002495876 
Protein GI220920575 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGTGG CGAGCCTGAC GCTTGCTGCT GTCGGATTTG CTGCTGAACT CCACCTTGCG 
GGCCAGCAGC ACCAAATTCA GCCTGCTCCG CCATCACCTG TTCCGGTCGT CATCGCCACC
GTCCAGCAGC ACGACGTGCC GCTGGTCCTG AGCGGGGTCG GCACAGTTCA GGCGCTCAAT
GCGGCAACCG TCCGGACACA GGTCACGGGC ATCCTCGAGA ACGTGGAATT CACCGAGGGG
CAGTTCGTCA AGCGCGGCGA CGTGCTGGCG ACGATCGATC CACGCATCTA CCAGGCGCAG
CTCGATCAGG CCCGCGCCCA GCTCGCCCGC GATCAAGCCC TCCTCACCAA CCAGGAGACG
AACCTCAGGC GCGACGAGCC GCTCCTCCAG CGCGGCTTCG CCACGGACCA GCAGGTCGTC
ACCGAGCGGG CCCAGATCGC GCAGACGCAG AGCACCTTGA GGGCTGACCA GGCCCTGATC
GACAACGCCG CGACGCAGTT CGACTTCGCG ACTCTGCGCG CACCTTTCGA CGGCGTCACG
GGCGTGCGGC TCATCGACGT CGGCAACGTG GTTCATCCCA CGGACCCGAC CGGCATCGTG
GTGCTGACCC AGGTGCAACC GATCAGCGTG ATCTTCACTC TCCCGTCCGC GGACATCCCG
GCCGTGCAAG AGGCGCTGGC GCGCGGACCC GTCCAGACCG CCATCTACGA CCAGTCGGGC
ACGCGCCAGC TCGACACCGG CACCCTGCTC CTGATCAACA ACCAGGCGGA CCCGAACTCC
GGCACGGTCC AGCTCAAGGC GACCTTCCCG AACGCGCACC GGCAGCTCTG GCCGGGTACT
TTCGTGAACG CCCAGGTCAT CACCTCGGTC GGCCGCGGCG CCCTGACCAT CCCGACCGAC
GCCGTGCAGC AGAACGACCG AGGGCAGTAC GTCTTCGTCG TCGGTCCGGA CCGCACGGTC
TCGATGCGCC CGGTCCGCGT CGCGCAGCGC GTGCGGGGCA CGGCCCTGAT CGCGTCGGGC
CTCACCGCCG GCGAGAGCGT GGTGGTGCAG GGCCAGTACC GCCTCACGCC CGGGACGGCC
GTCGTGAGCG CACCGGCCTC CGAGGTCCCG AACACCACTA CGGCGAGCGC GGGGATGCTG
CCATGA
 
Protein sequence
MLVASLTLAA VGFAAELHLA GQQHQIQPAP PSPVPVVIAT VQQHDVPLVL SGVGTVQALN 
AATVRTQVTG ILENVEFTEG QFVKRGDVLA TIDPRIYQAQ LDQARAQLAR DQALLTNQET
NLRRDEPLLQ RGFATDQQVV TERAQIAQTQ STLRADQALI DNAATQFDFA TLRAPFDGVT
GVRLIDVGNV VHPTDPTGIV VLTQVQPISV IFTLPSADIP AVQEALARGP VQTAIYDQSG
TRQLDTGTLL LINNQADPNS GTVQLKATFP NAHRQLWPGT FVNAQVITSV GRGALTIPTD
AVQQNDRGQY VFVVGPDRTV SMRPVRVAQR VRGTALIASG LTAGESVVVQ GQYRLTPGTA
VVSAPASEVP NTTTASAGML P